KEGG   Camelina sativa (false flax): 104711417
Entry
104711417         CDS       T05044                                 
Name
(RefSeq) uncharacterized protein LOC104711417
  KO
K12825  splicing factor 3A subunit 1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104711417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104711417
Spliceosome [BR:csat03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104711417
 Complex B
    104711417
 Complex C
   U2 SnRNP specific factors
    104711417
SSDB
Motif
Pfam: Surp DUF6577
Other DBs
NCBI-GeneID: 104711417
NCBI-ProteinID: XP_010426417
UniProt: A0ABM0THA6
LinkDB
Position
9:19629433..19632057
AA seq 769 aa
MSEGVVITEQPPETTGWWVEKTARMVAVKGPELEKLILDLNMDNNIFDFLKSSDHPCHAL
YQQKLAEYRSQQNNQGGGSQEPVCDAKSYLLKEIELGVIKFTALFVARYGDIFRESLMET
VVMNPRFDFMKPSDSNFTLYDALVVSYSGVLKPSNNGAMVDSLVDCYFNSLQLEKLEEGV
ETAVIDLHAFVGGLDCFAHMDDAVSPPERLSMMMHWPMQPQLPDDASATHDCLGDAETAF
APPPIRITLKELGIIKLTSQFVARYGMRFRRALMMRVAMNPLFEFMFFRPSSKKTIRMNP
PFEFMDPTEIRFNIFDVLVDAYSRVLVPSKKLKKSDACTRTVLENFSNCLQLERLEDGVE
ETTLIDLFAFVSGVDCFAHMDVAEYSATMPQPERLSVMMKRLTQQTQRPYMLLQLPLGSQ
LTNHGVGKQYECIGDTSLRAPILRSLTFRVPAMGITLKELGIIKLTAQFVARYSSEFSCA
LEKVPSFEFLDPSDSRFYFYLGLFNAYRKVLKSSIKLKKPDVCMLSTVLEGFHQRLRLCE
LQKGVEIAMVDLHAFVSGVDCFAHMEDDDYSAIMDPPERTSMMIDQLTQPDQEAQSSREQ
RLRRGYDFPYAFGAKITLKELGIMKFTALYVARYGMHFCHDLMKEVVMKPQFKFMEPTNS
MFSLYSVIVDAYSRVLEPSDNACTKTVLEDFYLRLQLEKLEVEEEEAMIDLHAFVSGVDY
FAVLEDADYSALVPPPHSQFADASMGMMPRPEEPEAKRQKLDDNTTKIV
NT seq 2310 nt   +upstreamnt  +downstreamnt
atgtcggagggtgtagtaatcactgagcagcctccagaaaccactggatggtgggtagag
aaaactgcacgtatggttgcagtaaagggaccggagcttgagaagttgatcttggacctt
aatatggacaataacatattcgattttttgaaaagctcagaccacccttgtcacgcattg
taccagcaaaagcttgctgaataccgttctcagcagaataatcaaggaggtggatctcag
gagcctgtatgcgatgcaaaatcctaccttctcaaggagattgagcttggtgttattaag
ttcactgctctgtttgtggctcgttatggggatatttttcgtgagtctttgatggagaca
gtggttatgaaccctcggtttgactttatgaagccatctgatagcaacttcactctttat
gatgcgcttgtcgtttcgtattcaggggtattaaaaccttccaataatggtgctatggta
gactcccttgttgattgttatttcaacagtctccaattagagaagctggaggaaggtgtg
gagactgctgtcattgatttgcatgcttttgtgggtggtcttgactgttttgctcacatg
gacgatgctgtgtcaccacctgaacgcctttcaatgatgatgcactggccaatgcagcct
caactacctgatgatgcttcagctactcatgattgtctaggcgatgcagaaactgctttt
gcgcctcctcctataaggatcacactcaaggagcttggtattattaagctgacatcgcag
tttgtggcgcggtatgggatgcgttttcgccgggctttgatgatgagagtggctatgaat
cctctgtttgagtttatgttttttcgcccttcttccaagaagacaatacgtatgaaccct
ccgtttgagtttatggatccaaccgagatcaggttcaatatattcgatgtgcttgttgat
gcgtattccagagtactagtgccttccaaaaaactgaagaagagtgatgcttgtacgagg
accgttcttgagaacttttctaactgtcttcaattggagaggctggaggatggagtggag
gagactactttgattgatttgtttgcttttgtgagtggtgttgactgttttgctcacatg
gacgttgctgagtattcagctaccatgccacaacctgaacgcctttcagtgatgatgaag
cggttaacacaacaaactcagcggccttatatgcttttgcagcttccattgggatctcag
cttactaatcacggtgttggtaaacaatatgaatgtataggtgatacttctttacgtgct
cctattctaagaagcctaacatttagagtccctgctatggggatcacacttaaggagctt
ggtattattaagctgacagcgcagtttgtggcgcggtatagctctgaattttcgtgtgct
ttagagaaggtaccatcgtttgagttcttggatccttccgatagccgtttctatttttac
ttggggctgtttaatgcgtatagaaaagtgttaaagtcttctatcaagctgaagaagcct
gatgtttgtatgttgtcgaccgtgcttgagggttttcaccaacgccttcgattatgcgag
ctgcagaagggagtagagatagctatggttgatttacatgcttttgtgagtggggttgac
tgttttgctcacatggaagatgacgactattctgcaatcatggatccacctgaacgtact
tcaatgatgattgaccagctaacacaacctgatcaggaggctcaatcctcaagggagcag
cgtttaagacgtggatatgattttccatatgcatttggtgctaagatcacgctcaaggag
cttggtattatgaagttcacagctctgtatgtggcgcgttatgggatgcatttttgtcac
gatttgatgaaggaagtggttatgaaacctcagtttaagtttatggagccaactaatagc
atgttcagtttatatagtgtgattgttgatgcatattccagagtattagagccttccgat
aatgcctgtacgaagactgttcttgaggatttttacctccgtctacagttggagaagctg
gaggtggaggaggaagaagctatgattgatttgcatgcttttgtgagtggtgttgactat
tttgctgttctggaggatgctgactattctgctttagtgccaccacctcatagtcagttt
gcagacgcttcaatggggatgatgccacgacccgaggaaccagaggcaaagagacaaaag
cttgacgacaacacaacaaaaatagtgtga

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