Camelina sativa (false flax): 104711546
Help
Entry
104711546 CDS
T05044
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104711546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104711546
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
RNases
104711546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DNA_pol_A_exo1
SET_assoc
DEDDh_C
DUF3418
Motif
Other DBs
NCBI-GeneID:
104711546
NCBI-ProteinID:
XP_010426553
UniProt:
A0ABM0THM1
LinkDB
All DBs
Position
9:20589944..20592473
Genome browser
AA seq
409 aa
AA seq
DB search
MELQLATAEKEVLEELVKLLQSRDLRGEKGNWKEFLNVYDKNLQSPIDPSRRSRDDLVQF
LSTFKKKQDLQVLKFHANHLLIENMKQESEDKDTPEQMLVRLTFEHLNYPLDYLFQPYSE
DWFVSDVGLKMSEVMKSTQIVALDCEMVLCEDGTEGLVRVGAVDRDLKVVLDKFVKPDKP
VVDYRAHITGVTAEDIENATLSVADIQETLQPLLSEGTILVGHSLNRDLQVLKIDHPKVI
DTALVFKYSNARKLRRPSLNNLSKSILGYEVRKVDVPHDCVHDATAAMKLALAVIEKRAD
TTIKPSKEMLEVEKAKLFLHKIPHNVTSEELEQLLSGKFTLDVKPAKTERGYYCAFTVFD
NSEEADQAFENIDGIQMTDSLGLPQKLVVLKRSSGSRASLYVRKMVKDE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcaactagccaccgctgagaaagaagtgcttgaggagttggtgaagttactg
cagagtcgagatttgcgaggagaaaaagggaactggaaggagtttttgaatgtttacgac
aagaatctccagtcacctattgacccttcgaggcgttcccgtgacgatttggtccagttt
ctgtctacttttaagaagaaacaagatttgcaagttctgaaatttcacgccaatcatctt
ctcattgaaaatatgaagcaggaatccgaagataaagacactcctgagcagatgctagtt
agattgacctttgagcatctgaattaccctctagactatttattccagccatactccgag
gactggtttgtatccgatgttggattgaagatgtcagaggtgatgaaatcaactcaaatt
gtagctcttgattgtgagatggttctttgtgaagatgggactgaaggtttagttagagtt
ggcgctgtagaccgtgatttaaaggtggttcttgacaaatttgtgaaaccggacaaacct
gttgttgactacagggcacacataacaggtgtgactgctgaagatatcgaaaatgctaca
ctctctgtggcagatatacaggaaactttgcagcctcttctttctgagggtacgattttg
gtaggtcacagtttgaacagagatttgcaagtgttgaagatagatcatcccaaagtaatt
gataccgcgcttgtgttcaagtattcaaatgcacgaaagctcagaagaccttcacttaac
aaccttagcaagtctatattgggttacgaagtccgaaaggttgacgttcctcatgattgt
gtacatgatgcaacagctgcgatgaaacttgcacttgctgttatagagaaaagagctgat
acaacaatcaaaccatctaaagagatgctggaggttgagaaagcaaaactctttctacat
aaaatccctcacaatgtgacatctgaagagctggaacaacttctttctggaaagtttaca
cttgatgttaagccagcaaaaacggagagaggttactattgtgcatttactgtttttgat
aattcagaagaagcagatcaagcatttgaaaacattgatggaatccaaatgacggattca
ttgggtttgccacaaaaactggtcgtcttgaagcggagttcgggatcaagagctagttta
tatgtccgtaaaatggttaaagatgaatga
DBGET
integrated database retrieval system
