Camelina sativa (false flax): 104711868
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Entry
104711868 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104711868
03015 mRNA surveillance pathway
104711868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104711868
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104711868
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104711868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104711868
NCBI-ProteinID:
XP_010426943
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All DBs
Position
9:23276691..23279676
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AA seq
495 aa
AA seq
DB search
MADTVEKVPTVVESSSSSVEAPVIADKTEPTTTEKKKWGDVEDDDEEEAVSELNSLTIKE
EEKSDSVLEEPEDSNIKAVVSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAI
SLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPKLAEPQALCICPTRELANQNMDV
LQRMGKFTGITAELAVPESTRGGPSAPRRGPVTAHVVIGTPGTLKRWMSFKRLGLNHLKI
LVFDEADHMLATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQL
FVKREDLALDSVKQFKVLCPKEENKIEVIKDQIMELGDIGQTIIFVRTRVSAGKVHKALA
EMGYDVTSVHGNMSEVDRDKIVKEFKDCLTQVLIATDVIARGFDQQRVNLVVNYNLPTKY
ETGEPDYEVYLHRVGRAGRFGRKGAVFNLLLDDGGDKEVMDKIEKYFGANVKEIKSWNSE
EEYKSALKEAGLLDE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcggatacagtagagaaagttcccaccgttgttgagtcatcatcttcctccgtggaa
gcacctgttattgccgacaagactgagcccacgacaacggagaagaaaaagtggggcgat
gtagaagatgatgacgaagaggaagcagtatcggaactcaattctttgaccattaaggaa
gaagagaaaagtgattctgtgcttgaagaacctgaagattcaaacatcaaagcggttgtt
tcgggtgatacaccatatacatcagcgagtaggtttgaggatttgaacttatctcctgag
ttgatgaaaggcttgtacgtggagatgaagttcgaaaagcctagcaagattcaagctatc
agtttgcccatgattatgacgccacctcacaagcatctgattgctcaggcgcataacgga
tctggaaagaccacttgtttcgttcttggaatgttgagtcgggttgatcctaaactggcg
gagcctcaggcgctctgcatttgtcccactagagaattagctaatcagaatatggacgtt
cttcagaggatggggaagtttactgggatcactgctgaattagctgtgccagagtcaacg
agaggcggaccatctgctccaagacgaggtcctgttactgctcatgtggtgattggcacc
cctggaacgcttaagaggtggatgtcattcaagagactaggtctaaatcatttgaagatt
cttgtttttgatgaggctgaccatatgcttgctacggatggctttagggatgattccttg
aagataatgaaagacattgggagagttaatcccaatttccaggttctacttttctcggca
acttttaacgaaactgtcaaagattttgtggcgaggacagtcaaggatcccaaccaattg
tttgtcaaaagagaggatctagctttggactcggtaaagcagtttaaagttctttgcccg
aaggaggaaaacaagattgaagtcattaaggatcagattatggagcttggggatattggg
caaaccattatctttgtgagaacaagagtgtctgctggtaaggtgcacaaggcccttgcg
gaaatgggatatgatgtcaccagtgtccatggtaatatgtctgaagtggacagagataag
attgttaaggagttcaaagactgccttactcaagtgctaattgctactgatgtcattgca
agaggttttgaccaacagcgggtgaatttggttgtgaattataatcttcccactaaatat
gaaaccggagagccagattatgaggtgtaccttcacagggttgggagagctggccggttt
ggtcgtaaaggagcggtatttaacctgctgttagatgatgggggggataaagaggtgatg
gataagatcgagaagtattttggagcaaatgttaaggagattaagtcatggaactctgag
gaggagtataagagtgcgttgaaggaagctggcctgctcgacgagtga
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