Camelina sativa (false flax): 104711877
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Entry
104711877 CDS
T05044
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104711877
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104711877
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104711877
NCBI-ProteinID:
XP_010426955
UniProt:
A0ABM0TIM2
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Position
9
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AA seq
486 aa
AA seq
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MMLPRSCIVLSFSLFLFLPQMGFAMLNNRTVLLTPHPDPELVAYEVQWRVNASITRRQTL
DTTDQAGSDPCFTGNPIDDCWKCNPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSS
DDDAVNPRPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGC
ITLQYVSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRSKSDGDGISIFGSKDIWIDHCSL
SRCKDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEKLIQ
RMPRCRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVETPDG
DWKGWNWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKSASFITQITYHSGVLGVGGR
NNNLGMWTTTGSEGNGGLDSYNDYTDEMSGAGSAIRLSFSVLVLSFLLSSISYLVMFTSS
TQMFML
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttccaagaagctgcattgtactttccttctctctttttctgttccttccacaa
atgggcttcgccatgctcaacaacagaactgttcttctcacaccacatcccgacccggaa
ctagtcgcttatgaagttcagtggagagtaaatgcatctataactagacgtcaaactctt
gacacgacagaccaggccggttcagacccgtgcttcaccggtaacccaatcgatgactgt
tggaaatgtaacccaaactggcccaataaccgacaaggtctagcagattgtggaatcgga
ttcggacagtacgccttaggtggcaaaggtggtcagttttacttcgtcacagattcttcc
gacgacgatgccgtcaaccctagaccgggcactctcagatacggagtgatacaagaagag
ccattgtggatagtgttcccaagcaacatgatgattaagctaaagcaagagctaatattc
aatagttacaagacacttgatgggagaggagctaatgttcacattgttggtggtggctgc
atcactcttcaatatgtctccaatatcatcatccataacattcatatccaccattgttac
caatccgggaatactaacgtgcggtcaagtccaacgcactatgggttcagatcaaaatcg
gacggtgatggtatctcaatcttcggttcaaaggacatatggatcgaccattgttctcta
tcgagatgtaaggacggtctgatagatgcggtgatgggttccactggaattactatatcg
aacaacttcttctctcaccataatgaagtcatgcttctcggtcacagcgaccactacgaa
ccagacagtggcatgcaggtaacaattgcgtttaatcactttggagaaaaattgatacaa
aggatgcctaggtgtcgtcgtggatatatccacgttgttaataacgatttcactcaatgg
gaaatgtatgcgattggcggtagcggtaacccgactattaacagtcagggtaaccgctac
actgccccaaccaacccattcgccaaagaggtgactaagagagtggaaacaccggatggc
gattggaaagggtggaactggagatcagagggggacattttggtgaatggagccttcttt
gtggcatccggtgaaggtgcggagatgaggtatgagaaggcatatagcgtcgagcctaaa
tccgcctcattcattacccaaatcacatatcactctggcgtacttggcgtcggcggcagg
aataacaatcttgggatgtggactactacgggatcagaaggtaatggcggtttagattct
tataatgactataccgatgaaatgtctggtgccggttcagcgatccggttatctttctca
gttcttgtgttatcattcttgcttagttcaatatcatatcttgtcatgttcacttcttca
acccaaatgtttatgttgtaa
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