Camelina sativa (false flax): 104711881
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Entry
104711881 CDS
T05044
Name
(RefSeq) cell division control protein 48 homolog D
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
csat
Camelina sativa (false flax)
Pathway
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104711881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104711881
03009 Ribosome biogenesis [BR:
csat03009
]
104711881
04131 Membrane trafficking [BR:
csat04131
]
104711881
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104711881
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104711881
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104711881
Membrane trafficking [BR:
csat04131
]
SNARE
SNARE associated proteins
Others
104711881
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104711881
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104711881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
AAA_17
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
Parvo_NS1
AAA_18
ATPase_2
ABC_tran
IstB_IS21
Viral_helicase1
Vps4_C
AAA_7
NACHT
AAA_lid_PRS2_C
NB-ARC
AAA_24
TsaE
Zeta_toxin
DUF815
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
104711881
NCBI-ProteinID:
XP_010515813
LinkDB
All DBs
Position
6:15585443..15589147
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AA seq
810 aa
AA seq
DB search
MANEAESSDSKGTKKDFSTAILERKKAANRLVVDEAINDDNSVVCLHPATMEKLQLFRGD
TVLIKGKKRKDTVCIALADDTCDEPKIRMNKVVRSNLRVRLADVISVHQCPDVKYGKRVH
ILPVDDTIEGVSGNLFDAYLKPYFLEAYRPVRKGDFFLVRGGMRSIEFKVIETDPAEYCV
VAPDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDEIDAEILNSMAVTNEHFQTALGNSNPSALRETVVEVPNVSW
ADIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQI
FKSCLRKSPVAKDVDLRALANYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKRAES
PEAMEEDEEEIAEIKAGHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPNA
PTGTVGTAAVGGADPFATSGGAADDDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgaagctgaatcatctgattctaaggggacgaagaaggattttagcacagcg
attctggagagaaagaaggcggcgaatcgtttagttgtggatgaggccatcaacgatgat
aactccgtcgtttgtcttcaccctgccaccatggagaagctacaactctttcgtggtgat
accgttttaatcaagggaaagaagaggaaggatactgtgtgtattgctttagctgatgat
acttgtgatgaaccaaaaattaggatgaacaaggttgttaggtctaacctcagggttagg
cttgcagatgttatctctgttcatcagtgccctgatgtcaagtatggcaagcgtgttcat
atcttgcccgttgatgataccattgaaggagtttctggaaatctatttgatgcttacctt
aaaccttatttcttggaagcgtatcgtccggtgaggaagggtgattttttcttggttaga
ggagggatgaggagtattgagtttaaggttattgagactgatcctgctgaatactgtgtg
gtcgctccagatacagaaattttctgtgagggtgagccgattaagagagaggatgaggag
aggcttgatgaagttgggtatgatgatgttggtggtgtcaggaaacagatggctcagatt
cgtgaacttgttgagctcccattgaggcatccacagcttttcaagtccattggtgtgaaa
cctcccaagggaatcttgctctatggccctcctggttctgggaagacattgattgcccgt
gctgttgctaatgagactggtgcgtttttcttttgtatcaatggtcctgagatcatgtcg
aagctagctggtgagagtgagagcaacctcaggaaagctttcgaggaagctgagaagaat
gctccctctatcattttcattgatgagatcgattctattgctccaaaaagagagaagaca
catggggaagttgaaagacggatcgtttcccagctcttgacactaatggatgggcttaaa
gccagagcgcatgtgatcgttatgggagcaaccaaccgtcccaacagcattgatcctgct
ttgagaaggtttggacggtttgacagagaaattgatattggtgttcctgatgagattggt
cgtcttgaggttctaaggattcacaccaagaacatgaagctcgcagaagatgttgatttg
gaaagagtctccaaagacacacatgggtatgttggtgctgatcttgcagcattatgcact
gaagctgctctccagtgcatcagggagaagatggatgttattgacctagaagacgacgag
atagatgctgaaattctcaactctatggctgtgactaatgagcatttccagactgccctt
ggtaacagcaatccttctgctcttcgtgagacggttgtcgaagtgcctaatgtttcttgg
gcagacattggtggtcttgagaatgtcaagagggagctccaagagactgttcaatatcca
gtggagcatcctgagaaattcgagaagtttgggatgtcaccgtctaaaggagtcctattc
tatggtcctcctggttgtggaaagaccctcttggctaaggctattgcaaacgagtgtcaa
gccaacttcattagtatcaaaggtcctgagttactcacaatgtggtttggagagagtgaa
gccaatgtgagagagatattcgacaaggcacgccaatctgctccttgtgttcttttcttc
gatgagcttgactccattgccactcagagaggtaacagtgttggagatgctggtggtgca
gcagacagagtattgaaccagcttcttacagagatggatggaatgtctgctaagaagact
gtcttcatcatcggagctacaaacagaccagacatcatcgaccctgcgcttctacgtcct
ggtcgtctcgatcagctcatctacattcctcttcctgatgaagagtctcgttaccaaatc
tttaagtcttgcttaaggaaatcccctgtggctaaagatgttgacctgagggctcttgct
aactacacccaaggcttcagcggtgcagacatcacagagatttgccaacgttcttgcaag
tatgcgatcagagaaaacatcgagaaggatattgagaaggagaggaagagagcagagtcg
ccagaagcaatggaagaggacgaggaggagattgcagagattaaagctggtcacttcgag
gaatccatgaaatttgctaggagatcagtaagtgatgcagacattcgcaaatatcaggct
tttgctcagactctccagcaatctcgtgggtttggaagcgagttcagatttccaaatgct
ccgacagggactgtaggtactgccgcggttggtggagctgacccgtttgccacttccggg
ggagcagccgacgatgatgatctctacagttga
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