Camelina sativa (false flax): 104711965
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Entry
104711965 CDS
T05044
Name
(RefSeq) RNA polymerase sigma factor sigC-like isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104711965
Transcription machinery [BR:
csat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104711965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
104711965
NCBI-ProteinID:
XP_010427051
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Position
9:complement(23851855..23854915)
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AA seq
572 aa
AA seq
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MASFNSFPIPKQIVGSSSSSSSSSSSSSSSRPRILVRSTMASTNTMLVFVPPHPLIKHWL
SLLRCEQTSFPIFVRIPMTSVVPTRWSFLSSLKEESRIYTQKDPFRACACASATPYTRSS
NLYVELQDSKENIGEQMSSAEKSYTSRSMLQYNLLAKNLLALEETFLALDSLRIERDIML
QMGKLGAAEFFKTCLSRSRCSSVTSCLSDTNELVGTAPNQQHVFVSSRRKLKKIARSENG
DDQGSLPTGLRTTWNIIDVPRVRRPPKYRKKRERISRNEAEMSTGVKIVADMERIRTQLE
EESGKVASLSCWAEAAGMNEKLLMRNLHYGWYCRDELLKSTRSLVLFLARNYRGLGIAHE
DLVQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVHIPASIIRTINQ
IQKARKTLKTSHGIKYPADEEISKLTGLSVKKIRGANQCLKVVGSIETKVGDCFSTKFLE
FTPDRTMESPEEAVMRQSARRDLHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLR
VSKEWIRKIERRAMAKLRDQPNAEDLRYYLKQ
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccttcaattctttccccattcccaaacagattgttggttcttcttcttcttct
tcatcatcttcttcgtcttcctcttcttctcggccacgtatcttggtccgatcgactatg
gcatcgaccaatactatgctggtcttcgtaccgccacatcctttgattaaacattggctc
tccctcttaagatgtgagcaaacttctttccctatttttgttagaattccaatgacttct
gtggttccaacgagatggtcgtttctatcctcactcaaagaggaaagcagaatttatact
cagaaagatccttttagagcatgtgcctgcgcatctgcaactccttacacaagatcaagt
aatctctatgttgaactccaagattctaaggaaaatattggagaacaaatgtcttctgca
gaaaaatcatatacttctcgtagcatgttgcaatacaatttactagcaaagaacctttta
gcactagaggaaacttttcttgccttggactctttaagaattgaaagagatattatgttg
caaatgggcaagttgggcgctgctgagtttttcaaaacctgtctatctaggtctcgttgt
tcttcagtaacctcatgcttatctgacacaaatgagttggtgggtacagcaccgaatcag
cagcatgtctttgtatcatccagaaggaaattgaaaaagatagctagaagtgagaatggt
gatgatcagggttctttgccaaccgggttaagaaccacatggaacattattgatgtccct
agagtgagaagaccaccaaaatatagaaagaaaagagagaggatctctagaaacgaggct
gagatgtcaacaggagtcaagatagtggcggacatggagagaatcagaacgcagttggag
gaagaaagtggtaaggtagcgagtttgagttgttgggctgaagcagctgggatgaacgag
aaactcctgatgcgtaatctacattacggttggtactgtagagatgaactgttgaaaagc
acccggtctttggttctctttcttgcaagaaattaccgtggactgggaatcgcccacgaa
gatttagttcaggcagggtatgtgggggtgttacaaggagcagagaggtttgatcacaca
aggggttacaagttttcaacatatgtgcagtattggataagaaaatcaatgtccatgatg
gtgtcacggcatgcaagaggcgtccatattcctgcatcaataatccgaactatcaatcag
atccaaaaggctcgtaagaccttgaaaacgagccatgggataaaatatccggcggatgag
gagatttccaaactaacaggcctgtcggtgaagaagattcgaggagctaaccaatgccta
aaggtggtcggttcaatcgaaacaaaagtcggagattgcttttctacaaaattcctggaa
tttactccggacaggacgatggagagtccagaggaggctgtgatgaggcaaagcgcgagg
agagacttacatgatcttctagaagggctagagccaagagagaagcaagtgatggttcta
cgttatggtcttcaagactacaggcccaagtcccttgaagagattgggaagcttcttaga
gttagcaaagaatggattcggaagatcgaacggagagcaatggctaaactcagggaccaa
cccaacgcggaagacctcagatactatttgaaacagtaa
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