Camelina sativa (false flax): 104712148
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Entry
104712148 CDS
T05044
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104712148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104712148
03041 Spliceosome [BR:
csat03041
]
104712148
03036 Chromosome and associated proteins [BR:
csat03036
]
104712148
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104712148
Spliceosome [BR:
csat03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104712148
Complex B
104712148
Complex C
U2 SnRNP specific factors
104712148
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
104712148
TFTC complex
104712148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
104712148
NCBI-ProteinID:
XP_010427283
LinkDB
All DBs
Position
9:complement(25061846..25066077)
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AA seq
1212 aa
AA seq
DB search
MYLYSLTLQQATGITCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGA
IRSLAQFRLTGAQKDYLVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYL
AVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSVCGVDCGFDNPI
FAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG
ADGPSGVLVCAENFVIYKNQGHPEVRALIPRRADLPAERGVLVVSAAVHKQKTMFFFLIQ
TEYGDVFKVTLDHNGDNVSELKIKYFDTIPVAASICVLKLGFLFSASEFGNHGLYQFQAI
GEEPDVESSSSNLMEIEDGFQPVFFQPRRLKNLVSIDQVQSLMPLMDMKVLNLFEEETPQ
IFSLCGRGPRSTLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNAT
LVLSIGETVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
SIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFL
NSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIH
RGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTP
RKFVVQPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNADQMENGADDEDKED
PLSDEQYGYPKAVSEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLL
AVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIG
PVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIF
ADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDVSEEIEEDPTGGKIKWEQGKLNG
APNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGGIGALHAFTSRDDVDFFSHL
EMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEI
LKKLEDARNKII
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtacagtcttacactgcagcaggcgacgggaatcacctgcgcaatcaacggg
aacttctccggtgggaagacgcaggagattgcggtagcgcgtggcaagattctggatctt
ctccgcccagacgagaacggtaagatccaaacgatacactctgtggaagtattcggtgca
attagatccttagctcagtttaggttgaccggtgcgcagaaggattatctagtggttggg
tcagattcgggtaggatagtgatacttgagtacaacaaggagaagaatgtgttcgataaa
gttcatcaggagacctttggcaagtcgggttgcagaagaattgtgcctggccagtacttg
gctgttgatcccaaaggaagagctgttatgattggagcttgtgagaagcagaaactggtt
tatgttttgaacagagatactactgctaggttaaccatttcttctcctttggaagctcac
aagtctcatactatttgctattctgtctgcggtgtggactgtggcttcgataaccccatt
tttgcagccattgagcttgattactccgaggcagatcaggatcctactggccaagccgct
agtgaggctcagaagcatttgactttctatgagctcgatttggggctcaaccatgtctct
agaaagtggtctgaaccagttgacaatggtgccaatatgcttgttactgttcctggagga
gctgatgggccgagtggagttctggtttgcgccgagaattttgttatttacaagaatcag
ggtcatccagaggtgagagccttgatacctagacgagctgatttgcctgctgaacgagga
gttttggttgtttctgcagccgtgcacaagcagaagacaatgttcttctttttaattcag
accgagtatggcgacgtttttaaggttactctggatcacaatggggataatgtctccgag
ttgaagataaaatatttcgacaccattcctgtcgctgcttcgatttgtgttttgaagctg
ggtttccttttctctgcttcggaatttggaaaccatggtttgtatcagtttcaggccata
ggggaggaacctgatgtagagtcttcatcctctaatctgatggagattgaagatggtttt
cagcccgtcttttttcaacctagacgacttaagaaccttgttagcattgaccaagtccag
agtctgatgccactcatggacatgaaagtcctaaatctttttgaagaagaaacgcctcag
atcttttcactttgtgggagaggtccacgctccactctaaggatactgagacctggtttg
gccatcactgagatggctgtctctcagcttccaggtcagccaagtgctgtgtggacggtg
aaaaagaatgtgagcgatgagtttgatgcatatatcgttgtctcttttaccaatgctact
cttgttctttcgattggtgaaacagttgaagaagttaacgacagtgggtttcttgatact
accccgtccctggctgtctccctgatcggcgatgattctctcatgcaagtccatcccaat
ggtatccgccacataagggaagatggacgtattaacgaatggagaactcctggcaagagg
tcaattgttaaagttgggtataatcggcttcaagtggtcattgcattgagtgggggagag
cttatctactttgaggcagatatgacgggtcagctgatggaggtggagaaacatgagatg
tctggtgatgtggcttgcctggacattgcgcctgttcctgaaggaagacaaaggtctcgc
tttcttgcggtgggatcctatgataatactgtgcgcattctatctttggatcctgacgac
tgtctgcagattctcagcgtgcaaagtgtctcttcagctccggagtctctgctattcctc
gaagttcaggcatcgattggtggagatgatggtgctgatcacccggcaaatctcttcctt
aattctggtctgcagaatggtgttctattcagaacggtggtggatatggtgactggtcag
ctttcggattctcgatcccgcttcttgggactgaagcctcccaagttattctccatttct
gtgagaggtcggtctgcaatgctgtgtttgtctagccgaccttggcttggttatattcat
cggggacacttccacttgacgcctctttcttacgagactttggaatttgctgcccctttt
tcatctgatcagtgcgctgaaggtgtagtctctgtcgctggagatgctctgagaattttt
atgatcgatcgtcttggtgaaacgttcaacgaaacagtggtccctctgaggtacacgcct
agaaaatttgttgtccaacccaagcggaagttgttggttattatcgagagtgaccaggga
gcattcaccgcagaagagcgtgaagctgcaagaaaggagtgcttcgaggctggtggagtg
ggagaaaatggcaatgcagatcagatggagaatggtgcggatgatgaagataaggaggac
ccgctttcagatgagcagtatggttatccaaaagcagtttctgaaaagtgggtttcttgc
atcagagttcttgatcctaagacagctacgacaacttgcctcctggaacttcaggacaac
gaagctgcatacagtgtctgtacggtgaatttccatgataaagagtatggcactttgttg
gctgttggtacggtcaaagggatgcagttctggcccaaaaagaatctagtggctgggttc
atacatatttataggtttgtggaggatgggaaatctcttgagcttcttcataagacgcaa
gtagaaggtgttcctcttgctctgtgccagttccaaggaagactgctggcagggatcgga
cctgtcctcagattgtatgatttggggaaaaagagactgcttaggaaatgtgaaaacaag
ctctttccaaacaccattatctctatccaaacttaccgtgatcgtatatacgttggtgac
attcaggagtctttccattactgcaagtacaggcgcgatgagaatcagctatacatattt
gcagatgactgcgtcccgaggtggctgacagcatcgcaccatgtggatttcgataccatg
gcaggggcagataagtttgggaatgtgtattttgtgaggttgccgcaggatgtgtcggag
gagatagaagaagacccgacaggcgggaagatcaagtgggagcaaggaaagctgaacgga
gcaccgaacaaagtggacgagatagtacagttccatgttggggacgttgtgacgtgcttg
cagaaagcttcgatgatcccaggtggatcggaatccataatgtatggaacagtgatgggt
ggcataggggcattacatgcattcacatcccgtgatgatgtcgatttcttctctcatcta
gagatgcacatgaggcaggagtatcctcctctctgcgggagagaccacatggcttacaga
tctgcgtattttccggtcaaggacgtgatagatggagatctctgtgagcagttcccgaca
cttccaatggacttgcagaggaaaatagcagacgagttggatagaacacctgcggagatt
ctcaagaagctcgaagacgctaggaataagatcatttga
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integrated database retrieval system
