Camelina sativa (false flax): 104712291
Help
Entry
104712291 CDS
T05044
Name
(RefSeq) cysteine--tRNA ligase 1, cytoplasmic-like isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104712291
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csat01007
]
104712291
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104712291
Enzymes [BR:
csat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
104712291
Amino acid related enzymes [BR:
csat01007
]
Aminoacyl-tRNA synthetase
Class I (G)
104712291
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104712291
Prokaryotic type
104712291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
DALR_2
Mannitol_dh
Flu_PB2_3rd
Motif
Other DBs
NCBI-GeneID:
104712291
NCBI-ProteinID:
XP_019084918
UniProt:
A0ABM1QDT0
LinkDB
All DBs
Position
9:25896633..25899205
Genome browser
AA seq
479 aa
AA seq
DB search
MEVEKEKPELTLYNTMTQLKEVLKPINPGKIGMYVCGITSYDFSHLGHARAAVSFDLLYR
YLRHLGYEVTYVRNFTDVDDKVIDRANKCGENPLALSSRFCEEYLVDMAALQCLLPTHQP
RVSDHMELIIKMIEKIIENGCGYAVGGDVFFSVDKSPNYGQLSGQRLDHTQAGKRVAVDS
RKRNPADFALWKAAKTGEPSWESPWGPGRPGWHIECSAMSAHYLSPRFDIHGGGADLKFP
HHENEIAQTCAACEDSGVSYWLHNGHVTNNNTLEDLVKALSPYREEMSEGVGKAVQTAEA
KDIIKKVKSEFETKMSNDLNTAHILTGAFQDAMRFINVSITKLKKMQKKQRMSLVVSLVE
VEKAVREVLDVLGLLTTVSYAEFLKEMKQKALTRAEMGEEEVLRKIEERKMARKNKEFKR
SDKIRESLAVKGIYLEDTLGGTVWRPATPLILKPKFGLGKIALIFAIMFIFVGLFFYSR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggagaaggagaagccagaattgacattgtacaacacgatgactcaactgaag
gaagttttaaaacccatcaatcctggaaagatcggaatgtatgtctgtggtatcacctcc
tacgatttcagccatcttggccacgctcgtgccgccgtctcctttgaccttctttacaga
tacttaaggcacttgggttatgaggttacttatgttcggaattttactgatgttgatgac
aaggtgattgacagagctaacaagtgtggagagaacccattagctttgagtagtcgcttt
tgcgaggagtatcttgtagatatggctgctcttcagtgcctccttcccactcaccagcct
cgtgtcagtgaccatatggaactcattattaagatgattgaaaagatcattgagaacggg
tgtgggtatgcagtgggtggtgatgtgttcttctctgttgataaatcaccaaattacggt
caattatctgggcaacggctggatcatactcaagctggtaagcgtgttgctgttgactca
aggaagcgcaatcctgctgactttgcattatggaaggctgcaaaaactggtgaaccaagt
tgggagagcccttggggtccaggaagaccaggatggcacattgagtgcagcgccatgagt
gctcattacctgtctccgagatttgatattcatggtggtggtgcagacctgaaattcccg
caccatgagaatgagattgcacagacatgtgctgcttgtgaagatagtggtgtgagttat
tggttacataatggacatgtaaccaacaacaatacgttagaagaccttgtcaaagctctg
tcgccatatcgagaagaaatgagtgaaggtgttggaaaggctgtacagactgcagaagcc
aaagacattataaagaaagtgaagagtgagtttgaaacaaaaatgtcaaacgacttgaac
actgcacatatactcacgggtgctttccaagatgcaatgagattcataaacgtttcaatc
accaagctcaagaagatgcagaagaagcagcggatgtcactggtcgtgtcactggtggag
gttgagaaagcagtcagagaagttcttgatgtgcttggtttgctcacaactgtaagctac
gccgaatttttgaaagagatgaaacaaaaggcattaacaagagcagaaatgggagaagag
gaggtcttgcggaagattgaagaaaggaaaatggcacggaagaataaagagtttaagaga
agtgataagatcagagagtcgttggcagttaaagggatctatctggaggatacacttgga
ggaactgtctggagacccgccacccctttgattttgaagcctaaattcggtttaggcaag
atcgccttgatttttgctatcatgtttattttcgttggcttgttcttctatagtcgttga
DBGET
integrated database retrieval system
