Camelina sativa (false flax): 104712305
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Entry
104712305 CDS
T05044
Name
(RefSeq) autophagy-related protein 18d isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104712305
Membrane trafficking [BR:
csat04131
]
Autophagy
Other autophagy associated proteins
Others
104712305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_IFT140_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_Vps41
WDR55
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
PEP5_VPS11_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
104712305
NCBI-ProteinID:
XP_010427464
LinkDB
All DBs
Position
9:25979496..25982386
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AA seq
389 aa
AA seq
DB search
MDSHKNLQPGGYDSRNTFISSSRGPPEPDFGESDEAELVSVSWNQDYSCFAAGTSHGFRI
YNCQPFKETFRRELKDGGFKIVEMLFRSNILALVGGGPNSQYPSNKVLIWDDHQSRCISE
FSFRSEIRAVKLRRDRIVVVLEHKIYVYNFLDLRLLHQIENLANPRGLCCLSHHMNTSVL
ACPGIRRGQVRVEHFGLNMVQIINAHDSNIACMTMTLDGLLLATASTKGTLIRIFNTMDG
TRLQEVRRGVDRADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVIREDANSTEHETSSN
SLQSLVSPASGANPGSSLSFLRGVLPKYFSSEWSFSQFHVPEVSQYFAAFGAQNTIAIIG
MDGSFYRCNFDPVNGGEMTQLEHSRFLNS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggactcccataagaacctccagccaggtggttatgactcccggaataccttcatttca
agctctcgtgggcctccagagccagattttggtgaaagtgacgaagcagagttggtttct
gtttcttggaatcaggattacagctgttttgctgctggcacgagccatggttttcgtata
tataattgccaacctttcaaggaaactttcaggcgagagctcaaggatggagggtttaaa
attgtagagatgcttttccggagtaatatcttggcccttgttggtggtggacctaactct
cagtacccttctaataaagtcttgatttgggatgatcatcagagccgctgcatcagtgaa
ttttcttttcgttcggaaattcgtgcagtgaagttaagaagagatcgaattgttgttgtt
cttgagcacaagatatacgtctacaatttcctggatctaagacttcttcatcagattgaa
aatctggcaaatccaaggggtttatgttgcctctctcatcatatgaatacatctgtgctg
gcctgtccaggtattcgtcgaggacaggtccgagttgaacattttgggcttaacatggtt
caaatcattaatgctcatgattctaatatcgcgtgcatgaccatgacattggatggcttg
ctccttgcaactgccagtacaaagggaactctgattcgaattttcaacacaatggacgga
actcgtttgcaagaggtccgaagaggcgtggacagagcagatatctacagcattgctcta
tcaccaaacgtgcagtggcttgcagtatcaagcgacaagggaactgttcacatcttctct
cttagagtgagggtcattagggaggacgccaactccactgaacatgagacttcttcaaat
tccctgcagtctcttgtttctccagccagtggtgccaaccccggttcgtcactatctttt
ctgagaggagttctaccaaaatatttcagctcggaatggtcattctctcagttccatgta
ccagaagtctctcaatactttgcagcatttggcgctcagaacacaattgcgattatcggc
atggacggaagtttctacaggtgcaatttcgatccagtgaatggaggagagatgactcag
cttgaacattcccgtttcttgaactcgtag
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