Camelina sativa (false flax): 104712442
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Entry
104712442 CDS
T05044
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104712442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104712442
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104712442
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104712442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PGA2
Motif
Other DBs
NCBI-GeneID:
104712442
NCBI-ProteinID:
XP_010427648
LinkDB
All DBs
Position
9:26778700..26787859
Genome browser
AA seq
1662 aa
AA seq
DB search
MAQAQTTEGASQVVESVRFSFMTEKDVRKHSFLKVTSPVLLDNVERPVRGGLYDPIMGPL
NDKESCESCGQLKLCCPGHCGHIELVYPIYHPLLFSLLYNFLQRTCFFCRHFMAKANEVE
KCVSQLKLIMKGDVVSAKQVEVKDDSTSTKSENSDVSCDSGLTNDSSQECEDSDMEDQRW
TSLQFAEVTAVMKDFMKLSSKVCNKCKAKNPKLEKPMFGWVRMRGMEASAVGVNVIRGLK
VKSSTSRVENTDDCDDSGIDALSEAEDSGTEKREKSTETAKEFEEHKTGSKRDLLPSEVR
EILKDLWENEHEYCSFIGDLWQSGSEKVDYSMFFLESVLVPPIKFRPPTKGGDSVMEHPQ
TVGLNKVLLSNITLGNACTNKLDQSKVIARWMNLQESVNVLYDSKTASVQSQKDGSGICQ
LLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDIGIPLCFALKLIFPERVTIYNVEM
LMVAIINGPDVHPGATHFSDKLSTVKLPSDKKERIAIARKLGSSRGATTELGKTCDINFE
GKVVYRHIRDGDVVLVNRQPTLHKPSLMAHIVRVLKGEKTLRLHYANCSTYNADFDGDEM
NVHFPQDEISRAEAYNIVNANNQYTRPSNGDPLRALIQDHIVSSVLLTKRDTFLDKDQFN
QLLFSSGVTDMALSSFSEKSGKKVVVSASDAELLTITPAILKPVPLWTGKQVITAVLNQI
TKGHPPFTVEKATKLPVDFFKCRSKEVKPNSGDLTKKKDIESWKQDLNEDKLLIRKNEFV
CGVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQIHGFTCGVDDLIILKDM
DEERTKQLQECEKVGERVLRKTFGIDVDVQIDPQDMRSKIERILYEDGESALASLDRSIV
NDLNQCSSNGVMNDLLSDGLLKTPGKNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKR
VPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRS
GYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIGKFKELTVNQDMV
LQRCGEDMLSGSSSYISDLPISLKKDAEKFVEAMPMNERIDSKFVRQEELLKLVKSKFFA
SLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIKTP
IMTCPLLKGKTKEDASHITDKLRKITVADIIKSMELSVVPYTVHKNEVCSIHKLKINLYK
PEHYPKHTDITEEDWEETMTAVFLRKLEDAIEIHMKMLNRIRGIRNFVEDTSPSAGNETD
NDDSVSGKQTEDDDDDGEGTEVDDLGSDAQKRKKQAIDEMDYEENSDNETNEPSSISGVE
DPEMDSEDEDAEVSKEGTPEPQEETLEPQKKVKTVKKVKEQSKKKRRKFVKANGDRHISV
KCKGKKFEVHFRFGADEPHVLLAQIAQKTAQKVYIQNSGKIERCTVANCGDPQVIYHGDN
PKERREISNDEKKASPALHASGVDFPALWEFQDKLDVRYLYSNSIHDMLNIFGVEAARET
IIREINHVFKSYGISVSIRHLNLIADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATK
FIVQAATYGEKDTLETPSARICLGLPALSGTGCFDLMQRVEL
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagctcaaaccacagagggagcatcccaggtggtggaatctgttagattcagt
ttcatgacagagaaagatgttcggaagcatagtttcctaaaagttacgagtcctgtatta
ctcgataacgttgagaggcctgttcgtggtggtctctatgatcctatcatgggtccttta
aatgataaagaatcttgtgaatcatgtggtcagctcaagctttgttgtccaggacattgt
ggtcatatcgagcttgtctatcctatttaccatcctttgctgttcagtcttctttacaat
tttttgcagaggacctgtttcttctgtcgtcattttatggcaaaagcgaatgaggttgag
aaatgtgtttctcagctgaaacttattatgaagggtgatgtagtttccgcgaagcaagtg
gaggttaaagatgacagcacttccactaagtcagagaatagtgacgtaagctgtgattca
ggtttaaccaatgattcatcccaagaatgtgaagattctgatatggaagaccagagatgg
acatctcttcagtttgctgaagtcactgctgtcatgaaggattttatgaagttgtcatca
aaggtgtgcaataaatgcaaagcaaaaaatcctaaactggagaaacctatgttcggatgg
gttcgcatgagaggtatggaagcatccgcagttggagttaatgtgattcgagggcttaag
gtaaagtcgtctactagccgtgttgaaaatactgatgactgtgatgatagtggtatcgat
gcattatcagaagctgaagatagtggtacagagaaaagagaaaagtctacggaaacagct
aaagagtttgaagagcataagactggttctaagagagaccttttgccgagtgaggtcagg
gagatcttaaaagatctgtgggaaaatgagcatgagtactgctccttcattggtgatctt
tggcagagtggatctgaaaaagttgactactctatgttctttttagagagtgttcttgtg
cctcctattaaatttagacctccaacaaaaggaggtgatagtgttatggaacatcctcaa
accgtaggactgaataaggttttactatctaacataacactcgggaatgcctgtactaac
aaattagatcagtctaaggtaattgccagatggatgaatcttcaagaatcagtcaatgtc
ttgtatgatagcaaaactgcctcagttcaaagccagaaagacggctctggaatatgccaa
ttgttggagaaaaaagagggtctatttcggcaaaaaatgatgggaaagagagtgaatcat
gcatgcagatctgttatatctccagatccttatatcgctgtcaatgacatcgggattcct
ctttgttttgctctgaaattgatatttcccgagagggtgactatttataatgtcgaaatg
ttaatggttgctatcattaatggtcctgacgttcatcctggagctacccatttctcggac
aaattatctacagtgaagttgccttcggacaaaaaagaacgaattgcaattgcaagaaaa
ttaggctcctcacgaggagcgactacagaacttgggaaaacttgtgatatcaactttgaa
ggtaaagtagtctatcgacatatacgagatggtgacgtcgtccttgtgaatcgtcagcca
acattacataaacctagcttaatggcgcacattgtccgtgttctgaagggggagaaaaca
cttcgtctccactatgcaaattgcagtacatacaatgcagattttgatggtgatgagatg
aatgtgcattttccacaagatgagatttcacgtgctgaggcctacaatattgtcaatgct
aacaaccaatatactaggccgtcaaatggcgatccacttcgagctttaattcaggaccat
attgtcagttccgttttacttactaagagggacacatttttggacaaagatcaatttaat
cagcttctcttcagttccggtgtaactgacatggcactcagttctttttctgaaaaatct
ggcaagaaagtcgtggtatcagcttctgacgcagaattgttgacaattacgccggctatt
ttgaaaccagtgcctctttggaccgggaagcaggttatcactgcagtgttgaatcagata
accaaaggtcacccgccattcaccgtagagaaagctaccaaacttccagttgatttcttt
aaatgtagatcgaaagaagtaaaacctaatagtggagatttgaccaaaaagaaagacatt
gagtcatggaaacaggatcttaatgaagataaactgctcatcagaaaaaatgaatttgtc
tgcggtgtgattgacaaggcgcagtttgctgactatgggttggttcatacagtgcatgag
ctttatggttcaaatgctgctggaaatttgctttccgtttttagtcgtctatttacggtc
tttcttcagattcacggtttcacttgtggagttgatgatctcattattttaaaagatatg
gatgaagagaggacaaagcaacttcaagaatgtgaaaaagttggtgaaagagtactccgg
aagacctttggcatagatgttgatgttcagatagatcctcaggacatgagatccaaaatt
gaacgaattctttatgaggatggggaatctgccttggcatctttggacaggagcatcgta
aatgatctcaaccagtgttcaagcaatggtgtgatgaacgatttgctgtctgatgggtta
ctgaaaactcctggaaagaattgtatatcgctaatgacgatatctggggctaagggcagt
aaggttaactttcagcaaatctcttcacaccttggccagcaagatttagaaggaaaaaga
gttccccgaatggtttctgggaagacattgccatgtttccatccatgggactggtcccct
agggctgggggttttattagtgacagatttcttagtggtcttcgcccccaagaatattac
tttcattgcatggctggacgagaagggttagtcgatactgcagtgaagacatcgcgtagt
gggtatctgcaaagatgcttgatgaaaaatcttgagagtcttaaagtcaactatgattgt
actgtccgggatgctgatggatccatcattcagttccaatatggtgaagatggtgtggat
gttcatcggtctagcttcattggaaagttcaaagaactgacagtgaatcaagatatggtc
ctccaaagatgcggtgaagacatgctatctgggtccagtagttacatcagtgatctgcct
attagtcttaagaaggatgctgagaagtttgtggaggcaatgccaatgaatgaacgtatt
gattctaaatttgtgagacaagaagaactactgaagctggtgaagtcaaaattttttgca
agtcttgcccagccaggggagcctgtaggtgtacttgctgcccagtctgtaggagagcca
tcaacacagatgacgttgaatactttccatcttgctggacgcggagagatgaatgtgaca
cttggaattccacgtttgcaagagattttgatgactgctgcagcaaacattaagacacca
ataatgacttgccctttgctgaagggcaaaacaaaagaggatgcaagtcatattactgat
aagttgaggaagattaccgtggcagatataataaagagtatggaactttcagttgtacca
tatacggttcataagaatgaagtttgtagtattcacaagcttaagataaacctctacaag
ccagagcattatccgaagcacactgatatcactgaagaagattgggaagagacgatgacg
gctgtgtttttgaggaagttggaagatgcgatagagattcacatgaaaatgctcaatagg
ataaggggcataagaaattttgtggaagacactagtccaagcgctgggaatgaaactgat
aatgatgattctgtaagtggaaagcagactgaagatgatgatgatgatggtgagggtaca
gaggttgatgatcttggttcagatgcacagaagcggaagaaacaagcaatagatgagatg
gattatgaggaaaattctgacaatgagacaaacgaaccatcgtcaattagtggagtagaa
gaccctgagatggatagtgaggatgaggacgcagaagttagcaaggaaggtactccggaa
ccacaggaagagactctggaaccccagaaaaaggtaaaaacggtaaagaaagttaaagaa
cagagtaaaaaaaagagacggaaatttgttaaagctaatggagacagacatatctcggtg
aaatgtaaaggaaaaaaatttgaggtccatttcaggtttggtgccgacgagcctcatgtt
ttacttgcccagattgctcagaaaacagcgcagaaggtttacatccagaattctgggaag
atcgaaagatgcacagtggcgaattgtggtgatcctcaagtgatctaccatggagacaat
ccaaaggagagaagggaaatctccaacgatgaaaagaaagcctcaccagcactccacgca
tcaggggttgatttccctgcactatgggaattccaagataaacttgatgtcaggtacctg
tacagcaacagcattcacgatatgctcaacatttttggagtcgaagcagcaagagaaact
ataatcagagaaataaaccatgtcttcaaatcatacggtatttctgtaagcatcagacac
ttgaacctcattgcggactacatgacattttccggtggataccgaccaatgagccgtatg
ggaggaattgcagaatcaacttcaccattttgcagaatgacatttgaaacagccactaaa
ttcattgtccaagcagctacttatggagaaaaggacacactagaaactccctctgctagg
atctgtcttggcttgcccgcgctttcaggaaccggatgctttgatttgatgcagagagtg
gagctctga
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integrated database retrieval system
