Camelina sativa (false flax): 104712787
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Entry
104712787 CDS
T05044
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104712787
Enzymes [BR:
csat01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
104712787
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
104712787
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TraT
FAM219A
Motif
Other DBs
NCBI-GeneID:
104712787
NCBI-ProteinID:
XP_010428062
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Position
9:28544811..28548114
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AA seq
605 aa
AA seq
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MEDIEDLLAGGVGGAPPGFRLPLNAVGINPKTNKSKRSISKQDQITTASNRDSLAPPSLT
IPGTQTIYIKTFGCSHNQSDSEYMAGQLTAFGYALTEVPEDADLWLINTCTVKSPSQSAM
STLITRGRSGKKPLVIAGCVPQGSRDLKELEGVSVVGVQQIDRVVEIVEETLKGHEVRLL
TRKTLPALDLPKVRRNNFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVERVRTVI
SEGVKEIWLSSEDTGAYGRDIGVNLPVLLNAIVKELPSDQSTMLRIGMTNPPYILEHLKE
IAAVLRHPCVYTFLHVPVQSGSDSVLTAMNREYTASEFRTVVDTLTELVPGMQIATDIIC
GFPGETDEDFSQTVELIKDYKFPQVHISQFYPRPGTPAAKMKKVLSKIVKQRSRELTSVF
EAFAPYTGMEGREERIWITEVAADGIHLVGHTKGYIQVLVTGPESMLGSSAMARITSVGR
WSVFGEVIETFSSANRETEAKEKAKPPCSSNVSTCETCACSAESCCGEERSGEACNISEN
ISKQDNDQKVKSKKEGKEIQEVVVPRSNVANWGFIDKALVCGVFVSSLTLFVLFISVAIR
VLSRQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatcgaggatttgttggccggaggagtcggtggtgcaccaccgggattccga
ttaccgttgaatgctgtcgggataaatccgaagacgaataaaagcaaacgtagtatctcg
aaacaggatcagattactactgcttcgaatcgtgactcgcttgctccaccatctttgacg
attccaggaactcagacgatatacatcaagacgtttggatgttctcataatcagagtgat
agtgagtatatggctggtcagcttactgcatttggctatgcgttgacagaagtccctgag
gatgctgatctgtggctcattaacacctgtactgtgaagtcccctagtcagtctgcaatg
tctactcttataacgaggggtagaagtgggaaaaagcctcttgtgatagccggatgtgtt
cctcaaggcagtcgtgatcttaaagaactggaaggtgtaagtgtagttggagtccaacag
attgatcgtgttgttgagattgttgaagaaacactgaagggtcatgaagtgcggcttctt
actcgaaagactttgcctgcgcttgatctcccaaaggtacggaggaacaattttattgaa
attctcccgattaatgttggttgtttgggtgcctgtacttactgcaagaccaagcacgcc
cgtggtcacttaggaagctatacagtggatagtcttgtggagcgggtgagaactgttata
tctgaaggagtcaaggagatttggttgagcagcgaggacactggagcatatggtcgtgat
ataggagttaatcttcctgttctgcttaatgctattgttaaagagcttccttctgatcaa
agcacaatgctaaggattgggatgactaatcctccctatattcttgagcatttgaaagaa
atagctgctgttttacgtcacccatgtgtttacacctttctacatgtccctgtacaatcg
ggcagtgattctgtgttgacggccatgaacagggaatatacagcaagtgagttcaggact
gtggtagacaccttaacagaacttgtgccaggaatgcaaattgctactgatataatatgc
ggctttcctggtgaaaccgatgaagatttttctcaaacagttgaacttatcaaggattac
aagtttcctcaagttcatatttctcagttttaccccagaccggggaccccagcggcaaag
atgaagaaggtactaagtaaaatagtgaagcaacgaagccgtgaattgacttctgtcttt
gaggcttttgcaccttacaccgggatggagggcagagaagagaggatatggataacagaa
gtagcggctgacggaattcatttggttggacatacgaagggatatatacaggtcttagtt
actggaccagaaagtatgcttgggagttcagctatggcgaggataacatctgtggggaga
tggtcagtgtttggggaagtgattgagacatttagctctgcaaacagagaaacagaagcc
aaagagaaagcaaagccgccttgttcgtcgaatgttagcacttgtgagacttgcgcttgc
tctgctgagagctgctgtggagaagagagatcaggagaggcatgtaacatctctgaaaat
atctcaaaacaggataatgatcagaaggtaaagtcaaagaaagaagggaaggagattcaa
gaggtcgttgtaccgagaagcaacgtagcaaattggggtttcattgataaggcacttgtg
tgtggagtgttcgtaagttctctcaccctttttgttttgtttattagtgttgcaattaga
gttctgtcgcgtcaataa
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