KEGG   Camelina sativa (false flax): 104712990
Entry
104712990         CDS       T05044                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104712990
Spliceosome [BR:csat03041]
 Complex B
  Other components
   Complex B specific factors
    104712990
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st WDR90_beta-prop_4th LisH_TPL Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_SCAP Ge1_WD40 Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 DUF7165 VPS8_N Beta-prop_WDR35_TULP_N Beta-prop_HPS5 PQQ_3 Mala_s_1-like Beta-prop_NOL10_N Beta-prop_VPS8 zf_topless Beta-prop_IP5PC_F Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 104712990
NCBI-ProteinID: XP_019085624
LinkDB
Position
9:29488619..29493619
AA seq 492 aa
MALEIEARDVIKIMLQFCKENSLNQTXSTFISDINSGRWDSVLPQVSQLKLPRNKLEDLY
EQIVLEMIELRELDTXLSQSXVMGVMKQEQPERYLKMEHLLVRSYFDPHEAYGDSTKERK
RAQIAQAVAAEVTVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDTY
PNVLSHTIKFGKKSHAECGRFSLDGQFLASSSVDGFIEVWDYISGKLKKDLQYQAAETFM
MHDDPVLCIDFSRDSELLASGSQDGKMKVWRIRTGLCIRRFDRAHSQGVTSLSFSRDGSQ
LLSTSFDHTARIHGLKSGKLLKEFRGHTSYVNNAIFTSDGSRVITASSDCTVKVWDSKTT
DCLQTFKPPPPLRGNDASVNSVHLFPKNIEHIVVCNKTSSVYIMTLQGQVVKSFSSGKRE
GGDFVAACVSTKGDWIYCIGEDKKLYCFNYQSGKLEHFMMVHEKDVIGVTHHPHRNLLAT
YSEDGTMKLWKP
NT seq 1479 nt   +upstreamnt  +downstreamnt
atggcgctcgaaatcgaagctcgagatgtgataaagattatgcttcagttctgcaaagag
aactccttgaatcagacgtnctctacgtttatttctgatattaatagtggaagatgggac
tctgtactacctcaagtttctcagcttaagcttcccaggaataagcttgaagatctttat
gaacagattgtgttggagatgatagagcttcgagaattggacactnatctatcgcaaagt
anagtgatgggtgtgatgaaacaggagcaaccagagagatatctaaagatggagcatctt
ctagtcagaagctattttgatccgcatgaggcttatggagactcgactaaagagagaaaa
cgtgcacagattgctcaagctgtggctgccgaggttactgtggtaccaccttcacggtta
atggctttgataggtcaggctttaaagtggcaacaacatcaaggcctactccctccagga
actcagtttgacctctttcgtgggacagcagctatgaaacaagatgtagatgatacatat
cctaatgttcttagtcatacaataaagtttggtaaaaagagtcatgccgaatgcggtaga
ttttcactagatggacagtttcttgcatcttcatctgttgatggtttcattgaggtatgg
gattacattagtgggaagctgaagaaggatttgcaatatcaagctgctgaaactttcatg
atgcatgatgaccctgtcctttgtatagactttagcagggattcagagctacttgcgtct
gggtcacaagatggaaagatgaaagtctggcgtataaggactggtctatgcattcgtcgt
tttgaccgtgcacattcccaaggagttacaagtctgtccttctctcgggatggaagccaa
ttactgagtacctccttcgaccacaccgcaagaatccacggcttaaaatctgggaaattg
ttgaaagaatttcgcggtcatacatcttatgtaaataacgccatctttacaagtgatgga
agccgtgtaatcactgcctccagtgattgtacagtgaaggtctgggattcaaagacgaca
gattgtctacaaacatttaagccgccacctcctttacggggaaatgacgcatctgtcaat
tctgttcatctgttccctaaaaacatagaacacatcgttgtgtgcaacaagacatcatca
gtatacatcatgacgctccaaggacaggttgtgaagagtttctcatccggtaagagggaa
ggaggagattttgtagcagcatgtgtatctacgaaaggagattggatatactgcatcggt
gaagacaagaaattgtactgcttcaactatcaatccgggaaacttgagcatttcatgatg
gtgcatgagaaggatgtgattggtgtaacacaccacccgcatagaaatctccttgctacc
tatagtgaagatggcacaatgaagttatggaagccttga

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