Camelina sativa (false flax): 104713181
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Entry
104713181 CDS
T05044
Name
(RefSeq) zinc finger CCCH domain-containing protein 16 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104713181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104713181
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104713181
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
Motif
Other DBs
NCBI-GeneID:
104713181
NCBI-ProteinID:
XP_010428549
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All DBs
Position
9:complement(30235106..30238080)
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AA seq
443 aa
AA seq
DB search
MRKELCRNFQRGSCRYGENCKFLHPQQAKPNNPFGFGSQQQPQQQQQQQQKSSNPFGFGV
QSGGGGSSRPNQFQPFENTWSRTGSTPNAAGGASAQQTGGKQTQSADHKCTDPAACKRVM
QDDFKNERPMWKLTCYGHWKYFPCDVTGDISYEELRAMAYDEAKRGIPLQSIVERERNLQ
NSKIAEFENFLRNPYKGSVTANQSPFASPTPSIFPPTNQINSSPPAFSGFNQQPAFPNTN
AGGLSSSGPLNAFASFSHQSNNQQTTFPNTNAGGVSSSGPPNLFASFNQQPNNQQAAFPN
TNAGGVSSSGPSNAFASFNKQPNAFSVNTPQPVPSGPSGFQTQPSVAFKPASFGPGPGLA
TTPQNNNIFGRQTPTPAPNNSQNNAFNFNVPVASFTAPSVDTTNTSSGTELQIQGDPVDS
SIWLKEKWNPGEIPEQAPPDAFV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggaactctgcagaaactttcagcgtggcagttgtaggtatggggaaaattgt
aaatttcttcatccacaacaggctaaaccaaataatccctttggctttggttcacaacaa
caaccacaacaacaacagcagcagcaacaaaagagttctaacccttttggatttggtgta
caaagtggtggtggtggttccagcagacccaatcagttccagcctttcgagaatacatgg
tcacggacgggttctacacctaatgctgctggtggtgcttctgcgcagcagactggtggt
aaacagacgcagtctgcagaccataaatgcacagatcctgctgcgtgtaagcgggtaatg
caagatgattttaagaatgagagacctatgtggaaactcacatgctatggccactggaaa
tattttccatgtgacgttactggtgatatcagctatgaagagctacgtgcaatggcatac
gacgaagctaaacgaggaatacctctacagtctattgttgagagggagagaaatttgcaa
aactccaaaatagctgagtttgaaaactttctgcggaatccgtacaaaggctctgttacc
gccaaccaaagcccgtttgcttcacccactcctagtatattcccaccaaccaatcagatc
aattcttctcctccagcattctctggctttaatcaacaacctgcattcccaaataccaat
gctggtggactcagttcatctggacctctgaatgcctttgcaagcttcagtcaccaatca
aataatcaacaaactacatttcccaataccaatgctggtggagtcagttcatctggacct
ccaaatctctttgcaagctttaatcaacaaccgaacaatcaacaagctgcattcccaaat
accaatgctggtggagtcagttcatctggaccttcgaatgcctttgcaagctttaataaa
caaccaaatgctttcagcgtcaatacacctcaacctgttccttcaggtccctctggtttt
caaacccaaccatcagtagcattcaaaccagcgtcatttggacctggacccggactcgcc
acaactccacaaaacaataacatctttggtcgacaaactccaacgccggctcccaacaat
tcccagaacaatgcatttaacttcaatgtccctgttgcatctttcactgctccttctgta
gacacaacaaatacatcctccggaactgagctgcaaatacaaggtgatcctgttgatagt
agtatatggttaaaggagaaatggaatccaggggagattccagaacaagccccgccagat
gcctttgtttaa
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