Camelina sativa (false flax): 104713248
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Entry
104713248 CDS
T05044
Name
(RefSeq) vacuolar protein sorting-associated protein 35B isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
csat
Camelina sativa (false flax)
Pathway
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104713248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104713248
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
104713248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
104713248
NCBI-ProteinID:
XP_010428633
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All DBs
Position
9:complement(30562948..30569299)
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AA seq
791 aa
AA seq
DB search
MRTLAGVEDEEKWLAEGIAGIQHNAFFMHRALDANNLREVLKYSALMLSELRTSKLSPQK
YYDLYMRAFDQLRQLEIFFKDESRHGLPVVDLYELVQHAGNILPRMYLLCTVGSVYIKSK
QAPSKDVLKDLVEMCRGVQHPIRGLFLRSYLAQVSRDKLPEIGSDYEGDANTVIDAVEFV
LQNFTEMNKLWVRIQHQGPGTVREKQEKERNELRDLVGKNLHVLGQIEGVDLEMYKETVL
PRVLEQVVNCKDKLAQYYLMECIIQVFPDEYHLQTLEALLAACTQLMPTVDTKIVLTQLM
DRLSNYAASSPDVLHEFLQVEAFAKLSNAIGKVIDTQLEMPIVGAMTLFVSLLTFTLRVH
PDRLDYVDQVLGACVVKLSSVPKLEDARAMKQVVALLSAPLEKYSDIVTALTLSNYPRVM
DHLDDGTNKVMAMLIIQSIMKNDSCISTADKVEVLFELIKGLIKDLDGTNVEELDEEDFQ
EEQNSVARLIHMLDNEEPEEMLKIIYVVRKHLMTGGPQRLPFTVPPLVFSAVRLVRQLEA
QGGDIAGEDVPATLRKIFQILNQTIEALSSVPCPELALRLYLQCAEAASDCDLEPVAYEF
FTQAFILYEEEIADSKAQVTAIHLIVGTLQRINVFGVENRDTLTHKATGYSARLLKKPDQ
CRAVYACSHLFWVDDPEGIKDGERVLLCLRRALRIANAAQQMVNATRGSSGPVTLFVEIL
NKYLYFFEKGNPHITPSDIQSLIELINTEMLSDNGNTTIHSDPFFSSTLRYIRFQKQKGG
LMGEKYDLIKL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgctcgccggagtagaagacgaggagaagtggttggcggaaggaatcgccgga
atccagcacaacgctttcttcatgcatcgcgctttggacgcaaataatctcagagaagtt
ctaaagtactccgctctgatgctttcggagctccgcacatccaaactctctcctcagaaa
tattacgatctctatatgcgagctttcgatcaattgaggcagctggagattttctttaaa
gatgagagtaggcatggattacccgtggttgatttgtatgagcttgttcaacatgccggc
aacatattgcccaggatgtatctgctatgtacagtagggtctgtttatatcaaaagcaag
caggctccttctaaggatgttcttaaggatcttgtggagatgtgtcgtggtgttcaacat
cccattcgtgggctttttttgaggagttatcttgctcaagtgagcagggataaattacct
gagattggttcagactacgaaggagatgctaatactgtgatagatgcagtggaatttgtg
ctacaaaattttactgagatgaataagctctgggttcggatacagcatcagggaccaggt
actgttcgagaaaagcaggagaaagagaggaatgaacttcgtgaccttgttggaaaaaat
ctgcatgttctaggacagatcgaaggtgttgaccttgagatgtacaaagagactgttctt
cctagggtcttagagcaggtcgtcaactgtaaagataagctggctcagtattatctgatg
gagtgcataattcaagtctttcctgatgagtaccatttgcagactcttgaggccttattg
gctgcttgtacccaactgatgccaactgttgacaccaagatagtgttaacccaactaatg
gaccggttgtcaaactatgctgcctcaagtccagatgtgttacacgaatttttgcaagtg
gaagcttttgctaaattgagcaatgcaattggaaaggtgatagatacacagcttgagatg
cctattgttggagctatgactctgtttgtctctcttctgacttttactctccgggttcat
cctgatcggcttgactatgtggatcaagtattgggtgcatgtgtagttaaactttccagt
gtgcccaagctggaggacgcccgtgcaatgaaacaagttgttgcacttctgagtgctcct
ttagaaaaatacagtgacatcgttacagctcttacattgtcaaattatccgcgtgtcatg
gatcatcttgatgatggaacgaacaaagtaatggcaatgcttattattcaaagtataatg
aaaaatgattcgtgtatatcaactgccgataaggttgaggtgctgtttgaattgataaaa
ggacttataaaagatttggatggaaccaacgtggaggagcttgacgaggaggatttccaa
gaggaacaaaattcagttgcccgtctcatacatatgcttgataatgaagaaccagaggag
atgctaaagatcatatatgttgtgagaaagcatcttatgacaggaggacctcaacgcttg
ccttttaccgttcccccgcttgttttttctgcagttaggctggtcaggcagctagaagcc
cagggtggagatatagcaggagaagatgttccagcaaccctgagaaagatttttcaaatt
ctcaaccagacaatcgaagctctttcctcagttccatgtcctgaactggctctaaggctc
tacctccaatgcgctgaggctgcaagtgattgtgatcttgagcctgttgcttatgagttt
tttacccaagcatttatattatacgaggaagaaatcgcggactcaaaggcacaggtaact
gcgattcatctgatcgtaggaactttgcaaaggatcaatgttttcggtgttgaaaacaga
gacaccttgacacataaagcaaccgggtactcagcaaggcttttaaagaagcctgatcaa
tgtcgagcggtatatgcatgctctcacctcttttgggtcgatgatccagagggtattaaa
gatggagaaagagttcttctgtgtttaagacgtgcactgaggatagctaacgcggctcaa
caaatggttaatgcaaccagaggtagcagcggaccagtcacgctgtttgtagaaatcttg
aacaagtatctttacttctttgagaaagggaatccacatatcactccatcggatatacaa
agcctcatagagttaatcaacaccgagatgctaagcgacaacggtaacacaacaatccac
tcagatcccttcttttcaagcacattgcgttacataaggttccaaaaacagaaaggtggt
ttgatgggtgagaaatatgacctcatcaagttgtga
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