Camelina sativa (false flax): 104713275
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Entry
104713275 CDS
T05044
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104713275
Enzymes [BR:
csat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
104713275
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104713275
Prokaryotic type
104713275
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
GtgE
Motif
Other DBs
NCBI-GeneID:
104713275
NCBI-ProteinID:
XP_010428663
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All DBs
Position
9:complement(30641836..30643605)
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AA seq
447 aa
AA seq
DB search
MLTEDETDLYRGGEEPQKVAIIFAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPESI
RGKPKLYDFARSARTDKGVSAVGQVVSGRFNVDPPGFVDRLNSNLPNQIRIFGYKHVTPS
FSSKKFCDRRRYVYLLPVFALDPISHRDREAVMASLGSGEVYVKCIACSERGRKIPESVI
LSNKSSALRAALKIEALSSDLASLSSVDVGVARIQEDSRKLNTSSSEKVKMAEAKSKFCY
GEKEKERFSRILCCYVGSYNFHNFTTRMKADDPAAHRQIISFTADTVINLDGIDFIKCEV
LGKSFMLHQIRKMMGLAVAIMRNCASESLIQTAFSKDVDITVPMAPEVGLYLEECFFTSY
NKNFEDSHEKVSMEAYKEEAEAFKLKHIYSHIGATERRYGNMALWLHSLNHRNYPDLNFG
SHGHNADQVLVDKKVDETHHEEDQVSL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccgaagacgaaacagacttgtaccgcggcggcgaggagcctcaaaaagttgct
ataatattcgcgttttgcggtgttgggtaccaagggatgcaaaagaatccaggcgcgaaa
accattgaaggcgagctcgaagaagctctgttccacgccggagctgtacctgagtccatt
agaggcaagcctaaactatatgatttcgcacgatctgcacgaaccgataaaggagtgagt
gctgtgggtcaagtagtttcaggtcgattcaacgttgatcctcctggattcgtggatcgt
ctcaattcgaatctccctaatcagattaggatctttggttataagcatgttacgccgtcg
tttagctctaagaagttctgtgatcgaagaaggtatgtgtatctgctccctgtgtttgct
cttgatccaatctcgcatcgtgatagagaagcggtaatggctagtttaggttcaggagag
gtttatgttaagtgtattgcttgctcagagagaggtcgtaagattccagagtctgtcatt
ttgtcgaacaagtctagtgcattaagagctgcccttaagattgaagctttgagttctgat
ttagctagcttaagctcagtagatgttggagtagctaggatacaagaagatagtcgtaaa
ttgaatacaagttcatcagagaaagtcaaaatggccgaggcaaagagcaagttttgttac
ggtgaaaaggagaaggaaaggttcagtagaatactgtgttgttatgttggatcatataat
tttcataactttactacaagaatgaaagcagatgatccggctgcgcatcgtcagatcatc
tccttcaccgctgatactgtcattaatcttgatggtattgactttatcaagtgtgaagtc
ttgggcaagagcttcatgctacatcagattcgtaagatgatgggtcttgctgttgcaatc
atgaggaattgtgcttctgaatcacttatccagactgctttcagcaaggatgtggatata
actgtaccaatggccccagaagttggactctatctcgaggaatgcttcttcacgtcttat
aacaaaaactttgaagacagccatgagaaagtgtcaatggaagcatacaaagaagaagct
gaagcattcaaattgaagcatatatattctcatatcggcgctacagagcgaagatatgga
aatatggctctttggttgcattctttgaaccatagaaactatcctgacctgaattttggc
agccatggacataacgcggaccaagttcttgtggataagaaagttgatgaaacccaccac
gaggaagatcaagtctcattatga
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