Camelina sativa (false flax): 104713384
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Entry
104713384 CDS
T05044
Name
(RefSeq) SNW/SKI-interacting protein-like isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104713384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104713384
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19-related factors
104713384
Complex C
104713384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Ribosomal_S8
Motif
Other DBs
NCBI-GeneID:
104713384
NCBI-ProteinID:
XP_010428786
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Position
9:complement(31201900..31204463)
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AA seq
628 aa
AA seq
DB search
MTPLKDLLPDPKSTTTTHYDHSNDPWFKNRFVENEAEKTATITFKVVPVYLKRQGFRPKN
PEDFGDGGAFPEIHLAQYPLGMGRNKSNKPGAKTLPVTVDAQGNVVFDAIVRQNENSKKI
VYSQHKDIIPKILKDEGYLDTVLDEEEELQKEIQETAEETKAAIEKIVNVRLSAAQPSNV
ARQSGESKYIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLDPPKFKHKRVPKASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLS
EALYVAEQKAREAVSMRSKVQKEMSMKEKERKEQELRALAQKARSERTGAAVTMPVASDR
SDRGRSESVDPRGDYDNPRGDYDNPRGDYDNYDREREREREREGPKETREEREERIQREK
IREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEKVALGMASTGGKGGEVMYDQRL
FNQDKGMDSGFAADDQYNLYDKGLFTAQPTLSTLYKPKKDNDEEMYGNADEQLDKIKNTE
RFKPDKAFTGASERAGTKRDRPVEFEKEEEQDPFGLDRWVSDLKKGKKPLDKIGSGGTMR
ASGGGGSSSRDDHGGSGRTKINFERSGR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctcttaaagaccttttacctgaccccaaatcaaccactaccacgcattatgat
cattctaatgatccatggttcaaaaaccgtttcgttgaaaacgaggccgagaagaccgca
accatcacctttaaagtggtgcctgtttacctgaaacgtcaaggtttccgtcccaagaac
cctgaggattttggtgatggtggtgctttccctgagattcatcttgctcagtatcctctt
ggtatgggtaggaataaatcaaataagcctggagccaagactcttcctgttactgttgat
gctcagggtaacgttgtctttgacgctattgtgaggcagaatgagaactctaaaaagatt
gtttattctcagcataaggatattattccaaagattctcaaagatgagggatacttggat
actgtattggatgaagaggaggaattgcagaaggagatacaggagactgctgaggaaaca
aaagctgccattgagaagattgtgaatgtgagacttagtgcagcgcaacctagtaatgta
gcaaggcagtcgggtgagtcgaagtacattaagtataagccttctcagcaatctgcagcg
ttcaattccggtgctaaagagaggattattaggatggtggagatgcctgtagatccactt
gatccaccaaagttcaagcataagagagtcccaaaggcttctggttctcctcctgttccg
gtcatgcattcacctcccaggcctgttactgtcaaggaccaacaagactggaaaatccct
ccttgtatctccaattggaagaatccaaagggttacacaattcctcttgataaacgtcta
gctgctgatggaagaggcttacaggacgttcagatcaatgataactttgccaagttatca
gaggcgctttatgtagctgagcagaaagctagagaggctgtttcaatgcgttcaaaggtg
caaaaagagatgtcaatgaaggagaaggaaaggaaagagcaggaattgagggctcttgcc
caaaaagctcgctctgaaagaactggtgctgctgtgactatgcctgtcgcatctgacaga
tctgacaggggtaggagtgaaagtgttgacccaaggggtgattatgacaacccaaggggt
gattatgacaacccaaggggtgattatgacaactatgaccgggagagagaaagggaaaga
gagagggaagggccaaaagagactagagaggaaagggaggaacggattcagagagagaag
atccgagaagagcgtcgtagggaaagagagagggagagaaggttggaagctaaagatgct
gccatggggaagaagagcaagatcacaagagacagagaccgtgatatcagtgagaaagtt
gctcttggaatggcatctacaggagggaaaggcggtgaagttatgtatgatcaacggctg
tttaaccaggacaaaggaatggactctggattcgctgctgatgaccaatacaatttatat
gacaaaggcttgtttactgcacaacccactctttcaacgctgtacaagccaaagaaggat
aacgatgaagaaatgtatggaaacgcagatgaacagctcgacaagatcaagaacactgaa
aggtttaaacctgacaaagctttcacaggggcttccgagagggctggtaccaagagagac
cgacctgttgagtttgagaaggaagaggaacaagatcctttcggtctagacaggtgggtt
tctgatttgaagaaaggtaagaaacctttggacaaaatcgggtctggaggaacaatgaga
gcaagtggcggtggtggtagctcttcaagggatgaccatggcggatctggtcgtaccaag
atcaatttcgaacgcagtggccgttga
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