Camelina sativa (false flax): 104713400
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Entry
104713400 CDS
T05044
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-like isoform X2
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104713400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csat03032
]
104713400
03400 DNA repair and recombination proteins [BR:
csat03400
]
104713400
DNA replication proteins [BR:
csat03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104713400
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104713400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
104713400
NCBI-ProteinID:
XP_010428809
UniProt:
A0ABM0TN68
LinkDB
All DBs
Position
9:31282063..31288908
Genome browser
AA seq
1140 aa
AA seq
DB search
MKTTQLFKGSNVFMSRNLVPPEVFDTLLDAFKLNGAEIVLCCDPSRSGPSDFHVIASPDH
EKFKSLTAKGCNLIGPQCALSCAKEGRPLPQGGFTCCLAMEGLKVLASGFLMDEKVKIRE
MVTSMGGVFLSKSSSDVNFVIVKNVLAAKYKWALNTQKKPVVTLNWLHQCWTEHRVVPQE
PYKVPPFSGLTICVTRIPGDERKGMEKVISEYGGSYSGELTRSCTHLIADAAEGDKYKVA
RKWGHIQIVTRKWFQQSIDRKVCLSEESYPVLSSIPLARGLRDKGIHHNVQEKFPLPTAV
SVSVADSYASCAQSRDSDIEASASQNIFSTSMNPSTDVKEPSEGPHTRPQEQDIDGCTAR
DSESEDNDLYLSDCRIFLLGFEASEMRRLFKLVCRGGGTRYMLLNESMTHIVVGTPSESE
KREVRSIAASGVVQVVTPSWLEDCDREKKEIPVHQLYTATHLILPRDSACLTKGSFAGMS
SMEQGKNTLGQTMAYDSSSRSINVSNGPATFLGNKEAMQEFGRKDEIHAERKIVSPKQKE
TLISPVTSKSKEQQSNQYEFNGQNVNERMSSVFKGKTFCFSHSFPEDRRPEIVEWVNQGG
GEVVVNDPLINNADFTIESHGGFRSAGTTHISYVSSHWVRSCLEDGCLVAVSSHIVYSPL
PCQTPLPGFESFCICSSQQDDKDIKLLSNLCYVLGAKFVKKLTKKVTHLLCNYANGSKYE
TASKWGIVSVTPDWVYECVRQNQVVSPNNFHPKELTTQDREAGSGASQFHTQFLPMSSRD
NVSLLVSHSEEREYIQDFSGKNGKGEVNNRLGEAGREQTFPSKKAKLFKDGQESHVSLLV
SHSEEREYIQDFSGKNGKGEVNNRLGEAGREQTFPSKKAKLFKDGQESHVSLLVSHSEER
EYIQDFSGKNGKGEVNNRLGEAGREQTFPSKKAKLFKDGQESHVSLLVSHSEEREYIQDF
SGKNGKGEVNNRLGEAGREQTFPCKKAKLVKDGQESHVFPVEEPPSNCDRPSKSGEGNVS
GNDTASSREVPDVADAIEDLSEQTSKIQHQKSPGRISEKTLFSTSEQYNTGNHSVTGLSR
HWINRVHKNDDTGSPPGNVTTGTYGNFSETQTESQVVSYEEDLSGRQMLIDRVRTRNSLT
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgacgcaactatttaaaggttccaacgtctttatgtctcggaatctggttccc
cctgaagtcttcgatacacttctcgatgctttcaaactcaacggtgccgaaatcgtcctc
tgctgcgacccttctcggagcggtccctccgattttcatgtcatcgcttctcccgatcat
gagaaattcaagagtcttacagccaagggttgtaacttgattggtccacagtgtgccctc
tcctgtgcaaaagagggtagaccgctgccacaagggggattcacttgttgtctagcgatg
gagggtctgaaagttcttgcttctggtttcctgatggatgagaaggtcaagatcagagag
atggttacttccatggggggagtttttctttccaaatcttcttctgatgtcaacttcgtc
attgtcaaaaatgtcttggctgctaagtacaagtgggctctgaatactcagaagaagcca
gttgttacactgaattggttacatcagtgttggactgagcaccgtgtggttccccaggaa
ccatataaggttcctcctttttctggattgacaatctgtgtcacaagaattccaggagat
gagcgtaagggaatggagaaggttatttcagaatatggagggagctactctggtgagcta
acaaggagttgtacacatctgatcgctgatgctgccgaaggtgacaaatacaaagttgct
cgaaaatggggtcacattcaaattgtcacacggaaatggtttcagcagtccatcgataga
aaagtctgtctcagtgaagagtcatatcctgttctcagttccatacccttggcacgaggg
ttgcgtgataaaggaatccatcataatgttcaagaaaagtttcctttgcccacagctgtg
tctgtgtctgtggcagattcatatgcttcttgtgctcagtctagagactcagatatagaa
gcttctgcctcacaaaatattttttccacttctatgaaccccagtaccgatgttaaagaa
ccaagtgaaggcccacatacaaggccgcaagagcaagatattgatggttgtactgccaga
gattcagaatccgaagacaatgacctgtacttatcagattgtagaatttttctgcttggt
tttgaagcttctgaaatgcgtagactttttaagttggtctgtagaggtggtggaacgcgg
tatatgctgctaaacgaaagcatgactcacattgttgttggaactccttcagagagtgag
aaaagagaggtgaggagtattgcagcttctggtgtcgttcaagtagtcacacccagttgg
cttgaagattgtgatcgtgagaaaaaagaaattccagttcatcaattatatactgctacc
catttgattcttccaagagattctgcatgcttgaccaagggatcatttgcagggatgtca
agtatggaacagggtaaaaatactctcggtcagaccatggcatatgattcatcttcaagg
agtatcaatgtttcaaatgggccagcaacttttctgggaaacaaagaagcaatgcaggaa
tttggcaggaaagatgagattcatgcggaaaggaaaatagtatcacccaagcaaaaagaa
acacttatttcccctgtaactagtaaaagcaaagaacaacagagtaatcaatatgaattc
aatggtcaaaacgtgaatgaaagaatgtcatctgtatttaaggggaagacattttgtttc
tcgcattcttttcctgaagatcggcgacctgaaatcgtggaatgggtgaatcaaggtgga
ggagaagtggtggtaaatgatcctctgataaataacgcagactttactattgaatcccat
ggtgggttccgaagtgccgggactacccatattagctatgtctcaagtcattgggttcga
tcttgtttagaggatggttgtttagttgctgttagtagtcatatcgtctactcacctctt
ccctgccagacacctttgcctggattcgaaagcttttgcatttgtagttcccaacaggac
gacaaggatataaaactcctgtcaaatttgtgttatgtacttggagcaaaatttgtgaaa
aaactaaccaagaaagtgactcacttgctatgcaactacgctaacggaagtaagtatgag
acagcttccaaatggggaatagtttccgtgacacctgactgggtttatgaatgtgttaga
cagaatcaagttgttagtcctaacaacttccatccaaaggaattgacaactcaagacaga
gaagcaggttctggcgcaagtcagtttcatacacagtttttgccaatgtcctcaagggac
aatgtgtctctacttgtaagccactctgaagagagggaatatattcaagatttttctggc
aaaaacggtaaaggtgaagtaaataacagacttggagaagctggaagggaacagactttt
ccgtctaagaaggcaaaacttttcaaagatggtcaagaaagtcatgtgtctctacttgta
agccactctgaagagagggaatatattcaagatttttctggcaaaaacggtaaaggtgaa
gtaaataacagacttggagaagctggaagggaacagacttttccgtctaagaaggcaaaa
cttttcaaagatggtcaagaaagtcatgtgtctctacttgtaagccactctgaagagagg
gaatatattcaagatttttctggcaaaaacggtaaaggtgaagtaaataacagacttgga
gaagctggaagggaacagacttttccgtctaagaaggcaaaacttttcaaagatggtcaa
gaaagtcatgtgtctctacttgtaagccactctgaagagagggaatatattcaagatttt
tctggcaaaaacggtaaaggtgaagtaaataacagacttggagaagctggaagggaacag
acttttccgtgtaagaaggcaaaacttgtcaaagatggtcaagaaagtcatgtgtttcct
gtggaagagcctccaagcaattgtgatcgcccttcgaagtccggagaaggcaatgtctct
ggaaatgatacagcaagtagtcgtgaagttccagatgtggctgatgcaattgaggatctg
tcggagcagacaagtaaaattcaacatcagaagtctcctgggaggatttcagaaaagact
cttttttcaactagtgaacaatacaataccggaaatcactctgtcactgggctgtctaga
cactggataaacagggtacataagaatgacgacacgggcagtcctccaggaaatgtaact
acaggcacttacggaaactttagtgagacgcagacagaatcgcaggttgttagttacgag
gaagatctttcaggaaggcagatgcttatagacagagttagaacacgaaatagcttaacg
taa
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