Camelina sativa (false flax): 104713429
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Entry
104713429 CDS
T05044
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104713429
03400 DNA repair and recombination proteins [BR:
csat03400
]
104713429
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
104713429
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
104713429
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT
HEAT_GCN1
Cnd1
HEAT_EF3_N
HEAT_Maestro
DUF1031
Stm1_N
OAD_beta
Motif
Other DBs
NCBI-GeneID:
104713429
NCBI-ProteinID:
XP_019085044
UniProt:
A0ABM1QE56
LinkDB
All DBs
Position
9:complement(31420360..31432042)
Genome browser
AA seq
1405 aa
AA seq
DB search
MEKTPTQIVSELGSRLLQLSRPNKDSLVKLLREVANTLSQIDQPPAINKEKGLKLLEVEL
RPLKKSIIKHGLLENQDNDVSLMVTICVSELFRILAPHLPFEDKYLKDIFNLFLAEFSEL
SDTVSPYFSKRAKILETVSRLKCCLLMLDEDQDLAQEMFRKFFSLVREHQKSLINQKNSK
TQQRKASVQQTQQSLFNNILTIMTDILEEEADSSFVIIILENLVKESEDTTSASGKLASS
VIESCTDRLEPLICSFLTSCFLEKDSIQTDLKYSYHEIIFKISLIAPKMLLAVIPKLTRE
LLTDQVDVRIKALNLAGRIFAQPKHCLSSYGETYQDLYAEFLRRFSDKSADVRMAALKCG
KQCYFANPSGNKTSGVLTAIQERLLDFDDKVRTEALVVACDIMKFNMKYVPLNLISEASE
RLRDKKISVRKKALQKLTEVYQDYCDKCSEGDMTINEHFEQIPCKILLLCCDKNCEEFRS
QNLELVLSDDLFPRLLPVEERMRHWVQCFAIMNNIHLKSLNSILSQKRRLQNELRHCLTL
WRTSKDGNIEEAQRKKKSYFVKLSACFPDASEAEDFFQKLDQMRDASIFDALTLLLDELS
STNAQIIKEKFLKTIGAKHSLFEFLRILSTKCSPNIFSSEHVQCLLNQLCGSTSVNTQLE
AASIKLLLVILNMFPSYLRGSEKQFLKLLEENDPAADELTVVLSKAAPYISVNFGDYYPV
LEKVCLEGTRSQAKYAVSAIGSLAGSSDKYVFSELCERLLDSLLAGRNIPTTLQSLACVG
QYSVLAYDNIYEDITSYIYQVFQAEPSDSQLLCDQSSGCCNSCKLKIYGLKTLVKSFLPR
HGQVVRKIDDLLDILKKTLKSQGHDGIKSCDDTGANVRLAAAKAVLLLSRKWDLHISPEI
FRLTILMAKDSNAFITKTFLTKLHKLVTEHMIPSRYACAFSFSVSTPCRDLQNDSFRYIN
GFINNATRESRACRDLDKGESLTDSPAYMIVFLIHVLAHDPEFPSEDCREEHVYTSFCGP
LFSVLQVLLSIKNNGYTIKETAPFLFCIFRAIKRAEDAVDSRKTPRLHILADIGYSAVNI
LNSIVVRSPQTPRSILLPSSLYSLTSITNNQNKAKSRAQNALEQSFIERVVHIFQSQNSL
LSKHDRRCQEDSLAVGSEDKILPPLLGNQIETSITGSTETSKNNTRCSRKRTHQGEQISC
NSKFLRTVESEIPIKKLERHNTRSKESIDASVSNKITSSKHSGVVSALKNISNHGEAIIG
QRIKLLSPADGCFHRGTIEKFNSKSNSHKIIFDNGDVELVCLDSESWETLSHESLQQQEI
LGKETESFASQNCVPGISHTLAKANAQKQKTTAKQQNKKLPTKLNPPAAANSKKGNSVSG
EGSVSEVTDPSDNIGLRRSRRQRTS
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaactccgacgcagatagtttccgaactgggttctcgtttgcttcagttatct
cgtccaaataaggattctctggtcaaattactacgggaagttgctaatactctgtcacag
atcgaccagcctccagccatcaacaaggagaaaggtctgaaactgctagaagttgagtta
agacctctgaagaaatccattataaagcatggtcttcttgaaaatcaagataatgacgtg
agtcttatggtcactatttgtgtctccgagctttttcggattttagcacctcatctacct
tttgaagacaagtatctcaaggatatcttcaatctctttcttgctgagttttctgagcta
tctgatactgttagcccttatttctccaagagggcgaaaatattggagacagtctctcga
ttgaaatgttgtcttctaatgcttgacgaggaccaagatttagctcaggagatgtttagg
aagttcttctctcttgtaagagagcatcaaaagagtttaattaaccagaaaaatagtaaa
acgcagcagcgaaaggctagcgtgcagcaaacacagcaaagtttatttaacaacatttta
acgataatgactgatattctggaggaagaggcagattcgtcttttgtcattattattctg
gaaaatcttgtgaaggagagtgaggacacaacttctgcttctggtaagcttgccagttct
gtcattgaaagctgtaccgacaggctcgagccgttgatttgcagctttttaacatcatgt
tttctggagaaagattccatccagaccgatctcaaatattcttatcacgaaatcatattt
aagatctccttaattgctcccaagatgctgctagcagttatcccgaaattgacccgagag
ctactgactgatcaggtcgatgtgcgaataaaagcccttaacttagctggaagaattttc
gcacagcctaagcactgtcttagctcttacggagagacatatcaagatctttatgcagag
tttttgagaagattctcagataaatctgcagatgtcagaatggctgcactgaaatgtggc
aaacagtgttactttgcgaatccgtctggaaacaaaacatctggagttctcactgctatc
caagaacgcctattagattttgatgataaagttcgaacagaggctctggttgttgcttgt
gatattatgaagtttaatatgaagtatgttcctttgaatctgatttctgaagctagtgag
aggcttcgggataagaagatatctgttaggaagaaggctctgcagaagctgacagaagta
tatcaagattattgtgacaagtgttcagaaggagacatgacaataaatgaacattttgag
caaatcccatgcaaaatcttgctactttgctgcgataaaaattgtgaagaattcaggtcc
caaaatttggagcttgtgctttccgatgatctttttcctcgccttcttccagttgaggag
aggatgcggcactgggtccaatgctttgccattatgaataatatccacttgaagtcactc
aattcaattttatctcagaaaagaaggttgcaaaatgaattgcggcattgcctaaccctc
tggaggacatctaaggatggcaatatagaagaagcgcaaagaaagaaaaagagctacttc
gtaaagctttcagcttgctttccagatgcttctgaggcagaagatttctttcaaaaatta
gaccaaatgagggatgcatcaatttttgatgctttaactttactgctggatgaactgtca
tccacaaatgcccagatcattaaagagaagtttctcaagacgatcggtgctaaacattct
ctttttgagttcctgcgcatactttctacaaaatgttcgcctaatatatttagctcagag
catgttcagtgtcttttgaatcagctttgtggcagcacctctgttaacactcaattggag
gctgcttccatcaaacttcttctggttattcttaacatgttcccttcttacctgagaggt
tcagaaaagcagtttctgaagctactagaggagaatgatccagctgctgacgagttaact
gtagttttatcaaaggcagctccttacatatctgtcaacttcggtgactattaccctgtt
ctggagaaggtgtgtcttgagggtactcgttctcaggcaaaatatgcggtttctgccatc
ggttcattggctggatcatctgataaatatgtcttttccgagttatgcgagaggctcttg
gattctttgctggctggacggaacattccaacaactttgcagtctttggcgtgtgttggg
caatattctgttttggcatatgacaatatatatgaagatatcaccagctacatataccaa
gtttttcaagcggaaccatctgacagtcaactgctttgtgatcagtcttctggttgttgc
aactcttgcaagcttaagatatatgggctcaaaacacttgtgaaaagtttcttgcctcgt
catggtcaagtcgtaaggaagatcgatgacttgctagacattttgaagaaaacattaaaa
tcacaaggacacgatggcatcaagtcatgcgatgacacaggggctaatgttagactggct
gctgctaaagctgttctattgctttcaaggaaatgggaccttcatatttctcctgaaatt
ttccgtcttaccattttgatggcaaaggattccaacgcctttatcaccaagacttttctc
accaaattgcacaagctagtgaccgaacatatgatacccagtcgatatgcatgtgctttt
tcgttttctgtgtctactccatgcagagatctgcaaaatgattcatttagatacatcaat
ggattcatcaacaatgctacaagagaatctcgagcatgtcgggatttagataaaggagaa
tcactcactgatagtccagcttacatgatagtgttcctaattcatgttcttgcacatgac
ccagagttcccttcagaagactgcagggaagagcatgtctatactagcttttgtggccct
ctgttctcggtcttacaggtgttacttagtatcaaaaacaatggttatacaatcaaggaa
accgcccctttcttgttttgtatcttccgtgcaattaaaagagctgaggatgctgttgat
tctcgtaaaacgcctaggctgcacattctagctgatattggttactcagctgtcaacata
ttaaatagtattgtagtcaggtctccacaaaccccacggtcaattttgctgccatcatca
ttgtacagtctcactagcataacgaataaccagaataaggctaagtctcgtgcccaaaat
gccttggaacaaagtttcattgaaagagtagttcatatattccaatcacagaattccctg
ctctccaagcatgatcggaggtgtcaagaagatagcctagcagttggttcggaagataaa
attttacctccattattgggcaatcaaattgaaacctcgattactggttcaactgaaacc
agcaaaaacaacacgaggtgtagcaggaagcgaactcatcagggagaacaaatttcttgt
aactccaaatttttgagaacagttgagtcggaaattcctataaagaagctagaaagacac
aatactcgttcaaaggagagtatcgacgcaagtgtaagcaataaaattacatcttccaaa
cactccggggtagtatctgctttaaagaatatcagcaaccacggcgaagcaatcattggg
cagcggattaaattactctctcccgcagatggatgtttccatcggggcactattgaaaag
tttaactctaaaagcaactctcataagattattttcgataatggggatgttgaattggtt
tgcttggatagcgagagctgggagaccctgagccatgaatccttgcagcaacaggaaata
ttgggaaaggagacggaatcgtttgcttctcagaattgcgtccctggaattagtcataca
ctcgcaaaggctaatgcccaaaagcagaaaacgacagcaaagcagcagaacaaaaagttg
ccaaccaaattgaatcctccagctgcagcgaactcaaagaaaggaaattcggtttctgga
gaaggatcagtttcagaagtgaccgacccaagtgacaatattggactcagaagaagtcgg
agacagagaacttcgtaa
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integrated database retrieval system
