Camelina sativa (false flax): 104713456
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Entry
104713456 CDS
T05044
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104713456
Enzymes [BR:
csat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
104713456
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104713456
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
Methyltransf_32
zf-U11-48K
Methyltransf_25
Methyltransf_12
Methyltransf_11
Maf_flag10_N
LLPH
MTS
Motif
Other DBs
NCBI-GeneID:
104713456
NCBI-ProteinID:
XP_010428869
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Position
2:complement(1194370..1196638)
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AA seq
448 aa
AA seq
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MEAKSSNRNRCSFWLPKKKRSCANSRIDSSVFCGNHSQRLEGEWIPCPIDPSHSVLQENL
EGHVKRCPLLKQTVALSGQSFYQKGINAGQEEEDKKMGSCSVVTSEMKRDLLYSMSVSKF
LQLIKKIDDVHGGICKDIEDSYLSPEACNIWFNKEIDRKIPFQEKHVLQQGSILGNLEKF
GVLKKCNENVGCCESNVEEKEDNSVSAVVEFGAGRGYLTQMLADCYGINKVYLVERKSYK
LKADRSLRQKENLVLERMRIDIEDLNLNAVESLHGVPYVAVGKHLCGPATDLSLRCCLSR
QDGESPVLRGLAIATCCHHLCQWKSYINKEYILSLGISKDEFHIMTSFTSWAVDDDHGSN
VPGVDDIDLLVSNAKEEEEGEVKDDSLSSVEEGVKKMKPMERAVLGFKCKQIIDAGRMKW
VKNHGLDSKLVKYIPASISPENTLLVAG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaagagtagtaatcgcaaccgatgcagtttctggcttccgaagaagaagaga
tcatgcgcgaattctcgaatcgacagttctgtgttttgtgggaaccatagtcagagattg
gaaggtgaatggattccatgccctatcgatccttctcactctgtgttgcaggagaatctc
gaagggcatgtcaagagatgtcctttacttaaacaaacagtagcattgtctggtcaaagt
ttttatcagaagggtattaatgccggacaagaagaagaagataagaagatgggatcttgt
tctgttgttacttcagagatgaagagggatctgctatatagtatgagtgtttctaagttt
cttcagctaattaagaaaattgatgatgttcatggaggtatttgtaaagatatcgaagat
tcgtatctgtcgcctgaagcttgtaacatatggtttaataaggagatagataggaagata
ccgtttcaagagaaacacgttttgcagcaaggttcgattcttggtaacttggaaaagttt
ggtgtattgaagaagtgcaatgaaaatgttggatgttgcgaaagcaatgtcgaagagaaa
gaggataatagtgtgtctgcggttgttgaatttggcgctgggagaggatacttaacacag
atgctagcagattgctatgggatcaataaggtgtatctagtcgagaggaaatcttataag
cttaaggctgatcggtcattgaggcaaaaggagaacttagtattagagcgtatgagaatc
gatattgaggatttgaacctaaacgcagttgaatctttacatggtgttccttatgtggct
gttgggaaacatctctgtggtcctgcaacagatttgagcttaagatgttgtttatcgaga
caagatggtgaaagccccgtacttagaggtctcgctattgcgacttgttgccatcatctt
tgccaatggaaaagctacataaataaagaatatatccttagcctggggatttccaaggac
gagttccatatcatgacttcgttcactagctgggctgttgatgatgatcacggttccaat
gttcctggtgttgacgacattgaccttcttgtttcaaatgcaaaggaggaagaagaagga
gaagtgaaagatgattcattgagcagcgtggaggaaggtgtgaagaaaatgaaacccatg
gaaagagctgttttaggttttaaatgcaaacagataattgatgcggggaggatgaagtgg
gttaaaaatcacgggttagattcaaagctagtgaagtatattccggcaagcatctcgcct
gaaaatactctactggttgccggatga
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