Camelina sativa (false flax): 104713588
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Entry
104713588 CDS
T05044
Name
(RefSeq) coatomer subunit alpha-2
KO
K05236
coatomer subunit alpha
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104713588
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104713588
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104713588
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104713588
Exosomal proteins of bladder cancer cells
104713588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
ENTH
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
104713588
NCBI-ProteinID:
XP_010429048
LinkDB
All DBs
Position
9:32093378..32100660
Genome browser
AA seq
1220 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHPQRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMR
FSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWE
VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHP
EINLLAAGHDNGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEYSTQKDSQVIPIRRPG
TPSLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVF
IARNRFAVLEKSTGQVLVKNLKNEVVKKSSLPIPTDAIFYAGTWNLLCRSEDKVVIFDLQ
RRLVLGELQTPFVRYVVWSNDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDN
SVFIYTTLNHIKYCLPNGDSGIIQTLDVPIYITKVSGNTIFCLDRDGKNRAITINATEYI
FKLALLRKKYDHVMSMIKDSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNI
SVAVASATEINEKDHWYRLGVEALRQGNSRIVEFAYQQTKNFERLSFLYLITGNLDKLSK
LMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLNDVAERLATEL
GDNVPSLPEGKTPSLLMPPTPIMCGGDWPLLRVMKGIFEGGLESANRGGAVDEEEDDVEG
DWGEGLDMVDVDGIENRDIEALLDGEEAADEDDEEGGWGGLEDLELPPELDTPKASANAR
SSVFVTPTQGMPISQIWSQKSSLAAEQAAAGSFDTAMRLLHRQLGIKNFAPLKAMFLDLF
SGSHSYLRAFSSSPVVPLAIERGWSESSSPNVRGPPALVFEFSQLEEKLKSGYKATTAGK
LTEALRVFLSILQTIPLVVVESRREVDEVKELVIIVKEYVLGLQMELKRREIKDDPVRQQ
ELAAYFTHCKLQTPHLRLAYFSAMTVCYKSRNMATAAHFARGLLDTNPTIESQARTARQV
LQAAERNMTDATTLNYDYRNPFVICGSTYVPIYGGHKDVSCPYCTARFVPSQEGNICTVC
DLSVIGADASGLLCSASQVR
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaagttcgagaccaagagtaaccgagttaaggggctgagtttccaccctcaa
cgaccatggattctggccagtttgcacagtggtgtgatccagctctgggattatcgtatg
ggcactttgatcgatagatttgacgagcacgaaggacctgttcgtggtgttcatttccac
aaatctcagcccttattcgtctctggaggggatgattacaagattaaagtgtggaactac
aaaactcacaggtgtcttttcacgcttctcgggcatcttgattatatccgcactgttcaa
tttcaccacgagaacccgtggattgtgagtgctagtgatgatcagactatccgcatatgg
aactggcagtcacggacttgtatttccgtgttgactggccacaatcattatgttatgtgt
gcctctttccatcctaaggaagaccttgttgtctcagcatcactggatcagactgtccgt
gtttgggacattggtgctcttaagaagaagtctgcttctcctgctgacgacctcatgcga
tttagtcagatgaattctgatctttttggtggggttgacgctatagtcaagtacgtcctt
gaaggtcatgacagaggagtcaactgggcttctttccatcctacccttcctctcattgtc
tctggtgctgatgaccgccaagtaaagctgtggcgtatgaatgaaaccaaagcttgggag
gtggatacattgcgaggtcatatgaataacgtttcatccgttatgttccatgcaaaacag
gacatcattgtatcaaactctgaggataaaagcatccgtgtctgggatgctaccaagcga
actggaatccaaacctttcgccgtgaacatgatcgattctggattcttgcagttcaccct
gagattaatttgctggcagcgggacatgacaacggtatgattgtcttcaaacttgagaga
gaacgtcctgcatttgctttgagtggtgattctttattctatgccaaggatagatttttg
cggtactatgagtattcaactcaaaaagattcccaagttattcctatacggcgtcctggt
accccaagcttgaatcaaagtcctaggactttatcctacagtccgacagaaaatgcagtc
ctaatctgctcagatctggatggtggttcgtacgagttgtacatcataccgaaagatagc
gttgggaggagtgacgttgtgcaagatgccaagagggggacagggggttctgcggtgttc
attgctcgcaatcggtttgctgttcttgagaaaagcaccggccaggtgctagtgaagaat
ctaaagaatgaggtggttaaaaagagttctttgcctattcccacagatgctatcttttat
gctgggacttggaatttgctttgtagatcggaggataaagtggttatatttgaccttcaa
cgaaggcttgttctcggtgagcttcagacaccttttgttaggtacgttgtttggtctaac
gatatggagagtgttgctttgctcagtaagcatactatcattattgcaagcaagaagctt
gtcctccagtgcacgcttcatgagacaatacgtgtgaaaagtggagcctgggacgacaat
agtgtcttcatttacacaactctgaaccacatcaagtactgtcttcctaatggagatagt
ggaatcatccaaaccctagatgtcccaatctatatcaccaaggtttctggaaatacaatc
ttttgcttggaccgggatgggaaaaacagggctatcaccattaatgcaactgagtacatt
ttcaagcttgcattgctgagaaagaaatatgatcacgtcatgagcatgataaaggactcc
cagctatgtggacaggccatgattgcttatcttcagcagaaaggatttcctgaagttgcc
ctccactttgttgaagacgagaggattcgattcaatttggctcttgaaagtggaaacatc
agtgttgctgttgcatccgctacagagattaatgagaaagaccactggtatagactcgga
gtggaggctcttcgtcaaggaaactctagaattgttgagtttgcctaccagcaaacaaag
aactttgagaggttatcttttctttatctcattactggcaatttagacaagctatcaaag
ttaatgaagattgctgaggtgaagaacaatgtaatgggtcagtttcacaatgctctctac
ctaggagatgttaaagagcgtgttaagatactcgagaatgcgggtcatttgcctctagcc
tatatcacagcttcggttcatggtttaaatgatgttgctgagcgactggcaactgagcta
ggagacaacgtgccctctttgcctgaagggaaaactccgtcgcttctaatgcctccaact
cccatcatgtgtggtggtgattggcctcttctgagggtgatgaaaggaatatttgaagga
gggcttgagagtgcaaacagaggaggggctgttgatgaagaagaagatgatgttgaagga
gattggggtgagggacttgacatggtcgatgttgatggaattgaaaacagagacatcgaa
gccttattggatggtgaagaagcagcggacgaagacgacgaggaaggtggatggggggga
cttgaagacttggagctcccaccagagcttgacactcctaaagcctctgctaacgctcgt
tcatcggtttttgtgacacctactcaaggtatgccgataagtcagatttggagccagaaa
tcgtcccttgctgctgagcaggctgcagcaggaagcttcgacactgcaatgcgtttgctc
cacaggcagcttggcattaagaactttgcgcctttgaaagccatgtttcttgatcttttc
agtgggagccatagctatctccgtgccttttcttcatctcctgtggttcctcttgcgatt
gagcgtggatggagcgagtcctccagtcctaacgtccgtggcccgccagctcttgttttt
gaattctctcagctagaagagaagctcaaatccggttacaaagccacaacagctgggaaa
ttaactgaggctctccgtgtcttcctctctattctccaaaccatcccattggtggtagtc
gagtcaagaagagaagtcgacgaagttaaggaactggtcatcattgtaaaagaatatgtc
ctaggtcttcaaatggagctcaagaggagagagataaaagatgatccggtgaggcagcaa
gagctcgctgcttacttcactcactgtaaactccaaacgcctcacctacggcttgcgtac
tttagtgcaatgaccgtctgctacaagtcaaggaacatggctactgctgctcactttgcc
agaggattgttggatacaaacccaactattgagagccaggcaaggacggctagacaagtt
ttgcaagccgcagaacgcaacatgacagatgcaaccacgcttaactacgactatagaaac
ccttttgtgatatgcgggtcgacttatgtgccaatctacggagggcacaaagacgtttca
tgtccttactgcactgcccggtttgtaccaagccaggaaggtaacatctgcacggtttgt
gatctctcagtcattggcgcagacgcatctggtttgctatgctcggcttctcaagttcgg
tga
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