Camelina sativa (false flax): 104713659
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Entry
104713659 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MSH6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
csat
Camelina sativa (false flax)
Pathway
csat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104713659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104713659
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104713659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
LBR_tudor
Motif
Other DBs
NCBI-GeneID:
104713659
NCBI-ProteinID:
XP_010429135
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Position
2:1349545..1357722
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AA seq
1325 aa
AA seq
DB search
MAPSRRQISGRSPLVNQQRQITSFFGKSASSSPSPSPSPAPSLSNKKTPKSNNPNPNSPS
PSPPKKTPKLNPNPDPPARSPTPGPATPSPVQSKFKKPLLVIGQTPSPPQSAEITYGDEV
VGKQVRVFWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLRKEKIEWVVGEKLGDR
FKRLRRGASALRKVVTDDDDDDDVEMGDVEEEKENKSDGDDSSDEDWGKNVGKEVCESEE
DDDVELVDENEMDEEALLEEKDEETPKVNRVSKIDSRKRKSSEVTKSGSEKKSRTDKDTI
LKGFKASVVEPPKKIVEADKVVKGLDDNILDGDALARFGARESEKFRFLGVDRRDAKRRR
PTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKSKHMDKVVFFKMGKFYELFEMDAHVGAK
ELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETPDQLDQRRKEKGSKDKV
VKREICAVVTKGTLTDGEMLSTNPDASYLMALTEGGESLNDQKADHNFGVCLVDVATKKI
MLGQFKDDQDCSALSCLLSEIRPVEIIKPAKVLSSATERTIVRQTRNPLVNNLVPLSEFW
DAEKTMHEVGIFYKRISCQPSSAYSSEEKILGDGSSFLPKMLTELATEDKNGSLALSALG
GAIYYLRQAFLDESLLRFAKFESLPYCDFSNVYEKQHMVLDAAALENLEIFENSRNGGYS
GTLYAQLNQCVTASGKRLLKAWLARPLYNTEMIKERQDAVAILRGENLPYSLEFRKALSR
LPDMERLIARIFSSIEASGRNGDKVVLYEDTAKKLVQEFISTLRGCETMAEACSSLRAIL
KHDKSRRLLTLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTV
EEFESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVPEILSGSVPNDYELCSSKKGVFR
YWTPTIKKLLKELSQANSEKESALKSISQRLIGRFCEHQEKWRQLVSTTAELDVLISLAF
ASDSYEGVRCRPVVSGSTSDDVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASF
ILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDRICVRMGAKDHIMAGQST
FLTELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIDKVQCRGLFSTHY
HRLSVDYQTNPKVSLCHMACQVGEGSGGVEEVTFLYRLTPGACPKSYGVNVARLAGLPDN
VLQRAVIKSKEFEALYGRKHGQTDGELAAMIKQIISSVASTDNSTSMDSLSKLYSMANTF
LQLTS
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggctccatctcgccgtcagatcagtggaagatctccgttggtgaaccagcagcgtcaa
atcacctccttctttgggaaatctgcttcatcttctccttctccgtctccgtcaccagct
ccatctctttccaataaaaaaacccccaaatctaacaaccctaaccctaattctccgtca
ccgtctccgcctaaaaaaacccccaaattgaaccctaatcccgatcctcctgctcgtagt
cccacccctggtcctgcgactccttctcctgtacagtccaagtttaagaagcctttgctc
gtcatcggacagactccttcgcctcctcaatcggcggaaatcacgtacggggacgaggtg
gtgggaaagcaggttagggttttctggccgttggataagaaatggtatgatgggagcgtg
actttttatgataagggtgagggtaagcatgtagtcgagtatgaagatggggaagaagag
tctttggatttaaggaaggagaagattgagtgggttgttggggagaaattaggagatagg
tttaagcgattgagacgaggcgcttcggctttgagaaaagttgtcacggatgatgatgat
gatgatgatgtggagatgggcgatgtggaagaagagaaagaaaataaaagtgatggtgat
gattctagcgatgaagactgggggaagaacgtggggaaagaggtatgcgagagtgaagaa
gatgatgatgtggaattggttgatgagaatgagatggatgaagaagcgctcttggaagag
aaagatgaagaaactcccaaggttaatagagtttccaaaattgactctagaaagcggaag
agtagtgaagtaacgaaatcaggcagtgagaagaaaagcaggactgataaagacactatt
ttgaaaggttttaaggcttctgttgtggagcctccgaagaagattgtagaagctgataag
gtagtcaagggtttggacgataacatattggatggagatgctctggctagatttggtgct
cgtgaatctgagaaattccgcttcctgggagtggaccgaagagatgctaaaaggagacgc
cctaccgatgaaaattatgatccgaggacactctaccttcctcctgattttgtgaaaaag
ttgactggaggccagagacaatggtgggagtttaaatcaaagcatatggacaaagttgta
ttcttcaagatgggtaaattctatgagctttttgagatggatgcacatgtaggagccaag
gaactggatatccagtacatgaagggagaacaacctcactgtggatttccggagaagaat
ttctctgtaaacatcgaaaaactagttagaaagggctatcgcgttttagtagtggagcaa
acagaaacacctgatcagctggaccaacgccgaaaagagaaaggttccaaggataaagtt
gtgaagcgtgaaatatgtgcagttgttacaaaaggcacgctgacagatggggagatgcta
tcaactaatccggatgcatcttatctaatggcattgactgaaggaggagaaagtttaaat
gatcagaaagcagaccacaattttggtgtctgtttggttgatgttgcgacaaagaagata
atgctgggtcagttcaaggatgatcaagattgcagtgcattatcttgcctgctatctgag
ataaggccggttgaaattattaaaccagctaaggtgttgagttctgcaaccgagagaaca
atagttagacaaaccagaaatcccttagtaaataatctggtcccactttctgaattctgg
gatgcagagaagaccatgcatgaagttggaattttctacaagcgaatcagttgtcaaccg
tcttctgcttattctagcgaggaaaagattctaggtgatggttcaagcttccttccaaaa
atgctgactgaattagcaactgaagataagaatggcagcctggcactctctgctcttggt
ggtgccatttactacctgcgacaagcattcttggatgagagtctgcttagatttgccaag
tttgaatccctgccttactgtgatttcagcaacgtttatgagaaacagcacatggttctt
gatgctgctgctctcgaaaaccttgagatatttgaaaacagtagaaatggaggctattcg
ggaacgctgtatgctcaactgaatcaatgcgtcactgcatctgggaaacggttactaaaa
gcatggctggcaagacctttatataatacggaaatgatcaaggaacgacaagatgctgta
gcaattctgcggggtgaaaatcttccgtactcactggaattccggaaggcgttgtccaga
cttccagacatggaacggttgattgcacgtattttttctagcattgaagctagtgggaga
aacggagataaagtggtgttatatgaagatacggcaaagaagctggtacaagaattcata
tcaactctacgtggttgtgaaacaatggcagaagcatgctcttctctccgtgctattttg
aagcatgataaatccaggcgtctgcttactttattaactcctggtcaaagtcttccgaat
atatcatcctccattaagtatttcaaggatgcttttgactgggtagaagctcacaattct
gggcgtgtaataccccatgaaggagctgatgaagagtatgattgtgcctgcaaaacagta
gaagaatttgagtccagtttgaaaaaacatctgaaagagcaacggaaattacttggagat
gcatcaataaattatgttacagttggaaaggacgaatacctcttggaagttcctgaaatt
ttaagtgggagtgttcctaatgattatgagttatgctcatcgaaaaagggtgttttccga
tattggactcctaccatcaagaaattattaaaagagctatcacaagcaaattctgaaaaa
gaatcggctctaaagagcatttcacagagattaattggacgtttctgcgagcatcaagaa
aaatggagacaattggtttctacaacagctgagctggacgtgttgattagcctcgctttt
gcaagtgattcttatgaaggagtaagatgccgcccagtagtatcaggttctacatctgat
gatgttccacacttatctgccactggtctagggcatccagttctaaggggtgattcgtta
ggcagaggttcttttgtaccaaataatgtaaaaataggtggtgctgagaaagccagtttc
atcctcctcacaggccctaatatgggtggaaaatccacccttcttcgccaagtttgcttg
gctgtaatcttggctcagattggagcagatgtcccagcagaaacctttgaggtttcgcct
gttgacagaatatgtgtgcggatgggtgcaaaagatcatatcatggcaggacagagcacg
tttttaacagaactttcagaaaccgcggtgatgttgacatcagcaacccgaaactcgctg
gtggtgctagatgagcttggacgaggaacagccacctcggatggacaagccattgcggaa
tccgtacttgagcacttcatagacaaggtgcagtgtagaggattattctctactcattat
catcgtctctctgtagattatcaaaccaatccaaaggtctcactttgccatatggcatgt
caagtaggagaaggaagtggtggagttgaagaagttacgtttctctatagattgacaccg
ggtgcatgtcctaaaagctatggagtcaacgttgctcggttagctggtcttccagataac
gtacttcagagagccgtgataaaatccaaagaatttgaggccttgtacggtagaaaacat
ggacaaactgatggtgaattggcagctatgataaagcagatcatcagtagtgttgcatca
actgataactcaacttcaatggactcattgtctaagctatactccatggccaacacattt
ctccagttaaccagctaa
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