Camelina sativa (false flax): 104713714
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Entry
104713714 CDS
T05044
Name
(RefSeq) BRCT domain-containing protein At4g02110-like isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104713714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csat03032
]
104713714
03400 DNA repair and recombination proteins [BR:
csat03400
]
104713714
DNA replication proteins [BR:
csat03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104713714
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104713714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
104713714
NCBI-ProteinID:
XP_010429204
UniProt:
A0ABM0TP71
LinkDB
All DBs
Position
2:1391020..1396736
Genome browser
AA seq
1341 aa
AA seq
DB search
MQESSFNPKTFLGVRFSLVGFNPIHGNAIRSKLVSGGGVDTGQSSQSCTHLIVDKLVYDD
PICVAARSSGKVVVTGSWVDHSFDTGMLVHVNSVLYKPLRDLNGVPGSKTLVVCLTGYQG
QDREDIMAMVDLMGGNFSKPLVANRVTHLICYKFEGEKYELAKRMKKIKVVNHRWLEDCL
KNWKLLPEVEYENSGYELEMMEASARDSEDEAEDASVKRAYRSPLGLRVGAVAATEMSNK
GEKDIPVVQTNSGGAQEGAPSCNTSKDNWLTPKNTDRPFEAMVSTDPGVVAQQHNYQRES
TFQNTSNHASPIRLANKTPEQGVSKLETDGLMSLNRSIRRHSSLATYSRKTLQISPETNT
LGKQSSGQNGSLQMVDKGLKALTSFSISASKSGSSLERKTLFNDLDKVDKLHGGESPSVV
PQAQFTDGSVSSNDSQKVHHNSEASIPPPTSLLLQELRPSSPNENNLRPATSINDPAESG
KFGHKSPDTKLLSSNVVHMVDALSTTENIISNCARDEIQERSLAEPMVGNDLFHEPMSGS
PKQNLRVVPNLSDHAGGREAADKLDLSDSAARLFNSGVVPMEADILIPENSTMKGALDEV
PERSVTEPLMKTSPGSGLIGLKDKQETELPKKKTAPKKSLGIRGRKKNSINQKGSIYLSE
PTPKDEPDDCLNKGKVSAPVTANSIQKELSGPVLNTEVVSEMAKHIVSETEAFQRIDSLD
NKSLVPEEKHHLGLDLMVNQGKQQAKTPEEVDVDVEIKVLTPEHTDVPVEDPSGSLQLEV
GKIKSKRKREATVCKNSLQSGKKESSSTVEVGKSSVKKTKKSKKEHDTEAIGTLMKDIGD
NSADDKDNLALERKSAKVSSGGDQGPVEGETLGRKEGATKDPSDAEVRSEVDANKGKRRK
EAIAEENRLQKPSVKKAKSSRKEDGAKANNTVMNDTEVQENVAVDNKSGDVSSDGAQSLV
AGKLLARKESAAKDSSNAAMQLEVDKNKAVVEKSSLQSGKIGSSATVEVGKSSVKKTKKS
KKGSGAKTTDTVMNDIGDDSAKEKENIVADNKSGKVGSGGEQSPLSGKALARKKVAKSAT
TGTKVDKESKQLRVKPLASRKVLQDQEHKPKFFIVSGPRSQRNQYQQIIRRLKGKCCRDS
HQWSYQATHFIAPEIRRTEKFFAAAASGSWILKTDYVADSKEAGKLLPEEPYEWHSTGLS
ADGAISLESPRKWRLVREQTGHGALYGVRIVVYGDCTIPSLDTLKRAVKAGDGMILATAP
PYTRFLNQNTDFALISPGIPRDDVWIQEFIRHEIPCVLSDYLVEYVCKPGYALDKHVLYN
TNSWAERSFNKMQLSADVCTI
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaatcgtcttttaatcccaagacgtttttgggtgttcgattctctcttgttgga
ttcaatcccatccatggaaacgcgatacggtcaaagcttgtgagtggtggtggcgttgat
actggccaaagctctcaatcctgtactcacctcatcgtagataagcttgtttatgatgat
ccgatttgcgtagctgctagaagcagcgggaaggtggttgtgacagggtcatgggttgat
cacagcttcgacactggaatgcttgttcatgtcaattcggttttgtataagcctcttaga
gatttgaatggtgttccaggttccaaaaccttagttgtgtgcttgactgggtaccaaggt
caagatagagaggacattatggcaatggttgatttgatgggtgggaacttctctaagcct
ttggttgcaaaccgagtcacccatcttatatgctacaagtttgagggagaaaagtatgag
ctagccaagcggatgaagaagattaaagtagtgaaccaccggtggttagaggactgctta
aagaattggaagctccttcctgaggttgagtacgagaatagtggctatgagttggagatg
atggaggcttcagctagggattctgaggatgaagcagaagatgcctctgtgaagcgtgca
tacagaagccctcttggtcttagggtcggtgctgtggctgcaactgaaatgtctaataag
ggagaaaaagatatccctgttgttcaaacaaactcaggcggcgctcaggaaggtgcacca
tcatgtaatacttccaaggacaattggttaactcctaaaaatacggacagaccttttgaa
gccatggtctctactgatccaggtgttgttgctcagcagcataattaccagagagaaagc
acatttcagaatacttccaatcatgcgtcccccattaggcttgcaaacaagactcctgag
caaggggtgagcaaattggagactgatggcttgatgtctctcaataggagtatcagaagg
cattcttctcttgccacttattcaaggaaaacacttcagatatcaccagaaacaaatact
ttgggaaaacagtcaagtggccaaaacggttctctgcaaatggttgacaagggcctaaaa
gctttgacttcctttagtatctctgcatcgaaatctggttcttcactggaaagaaaaaca
ctgtttaacgatcttgacaaggttgataagttgcatggcggggagtccccttcggtggtg
cctcaggcgcaatttacagatggatctgtcagtagcaatgattcacagaaggtacaccac
aacagcgaggcaagcattccaccaccgactagtttgttattgcaggaattaagaccaagt
tcgcctaacgaaaacaaccttaggcctgcgacgagcattaatgatccagctgaaagtggg
aaatttggccataagtcacccgacactaaactgttgagctcaaatgtggtacacatggta
gatgctctttcaactacggagaatatcatttcaaactgtgcacgggatgaaatacaggag
agatcattggctgagccaatggtgggaaatgacttatttcatgaaccaatgtcaggctcg
cctaagcaaaaccttagggttgtgccaaacctcagtgaccacgctggaggcagggaagct
gcagataagttggatctgagtgattcagcagctaggttgttcaattcaggtgttgttccc
atggaagctgatattttgattccagaaaattctactatgaagggtgcattggatgaagta
cctgaaagatctgtaactgagcctctgatgaagacctctcctgggtcgggtttaattgga
ttgaaagacaagcaagaaacagagctgcccaaaaagaaaacagctccaaaaaagagccta
ggcatcagaggcaggaaaaagaactccattaaccaaaagggatcaatatacttgagcgaa
cctaccccaaaggatgagccggatgattgtctaaacaaaggaaaagtttcagcgccagta
acggctaatagcattcagaaggagttatcaggccctgtcctaaatactgaggttgtatca
gaaatggcaaaacatattgtctcagagactgaagccttccagcgaattgactctctagat
aataaatctttagtcccagaagagaaacaccatcttgggttggatctgatggtgaaccaa
ggtaagcagcaggctaagaccccagaggaagttgatgtagatgtggaaattaaggtgcta
acacccgagcatactgatgttccagttgaagatccaagtggttcgttacaattagaggtt
ggtaagattaaaagtaaacgcaaaagggaggctactgtatgcaaaaatagccttcaaagt
gggaagaaagaaagctcttctacagtcgaagtaggaaaatccagtgtcaagaagaccaaa
aaatctaaaaaagaacatgatacagaagcaatcggtactctgatgaaagatataggggat
aactctgcggatgacaaggataacttagcattggaacgtaaatctgccaaggtcagttct
ggtggagaccaaggcccagttgagggagaaacattaggaagaaaggaaggtgcaactaaa
gatccaagcgatgctgaagtgagatctgaggttgatgcgaataaaggtaaacgcagaaaa
gaggccattgcagaagaaaataggcttcaaaaacctagtgtcaaaaaggcgaaaagttct
agaaaagaagatggcgccaaagcaaacaatactgttatgaatgataccgaagtgcaggag
aatgtagcagtagataataaatctggagatgtcagttctgatggagctcaaagcctggtt
gcggggaaactactagctagaaaggagtctgcagctaaggactcaagtaatgctgcaatg
cagttagaggtcgataagaataaagccgttgtagaaaaaagtagccttcaaagtggaaag
ataggaagttctgctactgttgaagtaggaaaatccagtgttaagaagactaaaaaatcg
aaaaaaggaagtggcgctaaaacaaccgacacagtgatgaacgatataggggatgactct
gcaaaagagaaggagaacattgtagcggataataaatctgggaaggtcggttctggtgga
gagcaaagcccgctttcaggaaaagcattagcaagaaagaaagttgcaaagtcagctaca
acaggtacaaaggtggataaagagtctaagcagctgagggttaagcccttggctagtaga
aaagtcttgcaggaccaagaacataagccgaagttttttattgtcagtggtcctaggtcc
cagagaaaccaatatcagcagatcattaggcgtttaaaaggaaaatgttgccgagattct
catcagtggtcttatcaagcaacacatttcattgctcctgaaatccgtaggactgaaaag
ttttttgctgctgctgcatctggaagttggattctgaagactgactatgtggctgattca
aaggaagctgggaaactattaccagaggagccttatgaatggcacagcactggtcttagt
gctgatggtgcgataagcctcgagtccccaaggaaatggcggctcgtcagggagcaaaca
ggacatggtgctttatatggagtgcgcattgttgtatacggtgactgcaccatcccttct
ctggatacattaaagcgagctgtgaaagctggggatggtatgatactagcaaccgcacca
ccttacacgcgtttcttgaatcaaaacaccgatttcgcgttgataagccccgggataccg
cgggatgacgtctggatccaagagtttatacgccatgaaatcccttgcgtcctctccgat
tacctggtggagtacgtttgtaaacctggatacgcacttgacaagcacgtgctctacaac
acgaactcatgggcagaaaggtcgtttaataagatgcagcttagtgcagatgtgtgtacc
atttaa
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