Camelina sativa (false flax): 104714224
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Entry
104714224 CDS
T05044
Name
(RefSeq) protein strawberry notch-like
KO
K26273
protein strawberry notch
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104714224
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104714224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
Zn_ribbon_FGT1_1
Zn_ribbon_FGT1_2
SBNO
PHD
ResIII
DUF349
PHDvar_NSD
Zot
PHD_4
Helicase_C
HECT_2
Motif
Other DBs
NCBI-GeneID:
104714224
NCBI-ProteinID:
XP_010429815
UniProt:
A0ABM0TQP4
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All DBs
Position
9:complement(35284548..35293578)
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AA seq
1302 aa
AA seq
DB search
MTQSPIQPPPPLPPPPHSAAAVGVLRGDVQVRCAGCRVILRVKTGVVEFSCPTCQLPQML
PPELLSRARPQFPQSQQPPQPPQPQPIQTLPPPIQQQLKPPPLNLPRPPVPAHGIDPTKM
QLPCANCQAILNVPHGLTRFSCPQCHVELAVDVSKLNRSLTAPHSHPNLPTPAAPPVPPP
PPPEEVNEEAIEVEREEDEGGTAGETFMDYRPPKLSIGPPHPDPIVETSSLSAVQPPEPT
YDLKIKEELERSKALSCLQIETLVYACQRHLQHLADGTRAGFFVGDGAGVGKGRTIAGLI
WENWKHGRKKALWISIGSDLKYDARRDLDDVGATSVGVNPLNKLPYSKLDSKNVGVKEGV
VFLTYNSLIASSEKGRSRLQQLVQWCGPEFDGLLIFDECHKAKNLVPEAGSQPTRIGQAV
VDIQDKIPQARVLYCSATGASEPRNMGYMVRLGLWGAGTSFSDFNKFLGALDKGGTGALE
LVAMDMKARGMYVCRTLSYKGAEFEIVEARLEEGMEAMYNKSAEFWAELRIELLSASAFL
PNEKPNSSQLWRLYWSSHQRFFRHLCMSAKVPVTVRLAKKALSTNKCVVIGLQSTGEART
EEAVTKYGLELDDFVSGPRELLLKFVEENYPLPEEPEPLSEDDSVKELQRKRHSASPGVS
IRGRVRKMAKWKPDSDDESDLESEAESADDSNDSDDEFQICQICSGEDERKKLLHCSECD
KLFHPDCVVPPVTDLPSEAWICYSCKEKTEEYIQARRLYIAELQKRYEAALERKLKIIEI
IRALNLPNNPLDDIVDQLGGPDKVAEITGRRGMLVRASNGKGVTYQARNTKDITMEMVNM
NEKQLFMDGKKFVAIISEAGSAGVSLQADRRAINQKRRVHLTLELPWSADRAIQQFGRTH
RSNQTSAPEYRLLFTNLGGERRFASIVAKRLETLGALTQGDRRAGPSGPSLSAYNYDSNF
GKKSLMVMYRGIMEQEKLPVVPPGCSVDEPETIKEFLTKARAALVAVGIVRDSVLANGKD
VGKFSGRIIDSDMHDVGRFLNRLLGLPPDIQNRLFELFTSILDVLVHNARIEGSFDSGIV
DMKANSVELLSTPKTVHVDQMSGASTMLFTFTLDRGVTWESASSMLEGKRRDGLGSANDG
FYESKREWLGKRHFILAFESAASGLFKIVRPAVGESIREMSLSELKTKYRKLSSLEKART
GWEDEYEISSKQCMHGPKCKLGEYCTVGRRIQEVNVVGGLILPIWGTIEKALSKQSRHSH
KRVRVIRIETTTDNQRIVGLSIPNAAVETVLQDLAWVQEIDD
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgactcagtcgcctattcaaccgcctccgccgcttcctcctccgccgcattccgccgcc
gccgttggtgtattaagaggcgatgttcaggttcgttgcgctggctgtcgcgtgattcta
agggtgaagaccggcgttgttgagttctcttgtcccacttgtcaacttccccaaatgttg
ccgccggagcttctttctagggcacggccgcagtttccgcagtctcaacaaccacctcaa
ccgcctcaaccgcagccgattcagacgcttccgcctccgattcaacagcagcttaagcct
cctcctcttaatttacctaggcctcccgttccggctcacggaatcgatccgaccaagatg
caattgccttgcgctaactgtcaggctatcctcaatgtgccacatgggctcactcgcttc
tcttgtccgcagtgccatgtcgagctcgctgttgatgtctccaagcttaatcgttcttta
actgctcctcattctcatcctaatcttcctactcctgctgccccgcccgttcctcctccg
cctccacccgaagaagtcaatgaggaagctattgaagtggagagagaagaagatgaaggt
ggaacggcaggagaaacatttatggattatcgtcctccaaaactttcaatcggacctcct
catcctgatccaattgtggagacatcatctctatctgcagtgcaacccccagagcccact
tacgatctcaaaatcaaggaagagctcgaaaggtcaaaggctttatcgtgcttgcagatt
gagacattagtttacgcttgtcagaggcatctccagcaccttgctgatggtaccagagca
ggcttttttgttggagatggtgctggtgtggggaaagggcgaacaattgcagggttgatt
tgggaaaactggaaacatgggaggaaaaaagctttgtggatttctattggctcagacttg
aagtatgatgcaagaagagacttggatgatgtgggtgccacatccgttggagtaaatcct
ttgaacaagctaccttattcgaagcttgactcaaaaaatgtcggtgttaaagaaggagtg
gtattcttgacatacaatagcctcattgcttcctctgagaagggccgttctcgtttacag
cagcttgttcaatggtgtggaccagaatttgatggtctcttaatttttgatgagtgccat
aaagcgaaaaatttggtacctgaagctgggagtcagccgacacgcatcgggcaggcagtt
gttgacattcaggataagatcccccaagcacgtgttctttattgctctgctactggtgca
tcagaaccacgaaacatgggttatatggtcaggcttggtctttggggagctggaacaagt
ttcagtgatttcaacaaatttttaggtgcccttgataaaggtgggacgggagcgttggaa
ttggttgcaatggacatgaaagcgagggggatgtatgtatgccgaaccctgagctacaaa
ggggctgagtttgagattgttgaagctcgtttagaagaaggaatggaggcaatgtacaat
aagtctgcagaattttgggcagagctacggatagagttattgtcagcaagtgcttttctc
cctaacgagaaaccaaattctagtcagttgtggagattatactggtcaagccaccagcgt
ttctttagacacttatgtatgtcagctaaagtccctgtaactgtgagattagcgaagaaa
gccttgtcgacaaacaagtgtgtggttattggccttcagagtaccggagaggctcgaacc
gaagaggctgtaactaaatatggtcttgagcttgatgattttgtctcgggacctcgagag
ctcttgttaaaatttgtcgaagagaattatcctttgcccgaggagcctgaacctctgtca
gaggatgatagtgttaaagaacttcagaggaagagacattcagcttcacctggtgtttca
attagaggaagagtaagaaagatggcaaagtggaaaccagatagtgatgatgaaagtgat
ttggagtctgaagctgagtctgctgacgattctaatgattctgatgatgagttccagata
tgtcagatatgcagtggggaagatgaaaggaagaagttgctccattgttctgaatgtgac
aagctttttcatccggactgtgtggttcctccagttacagacttgccatctgaagcgtgg
atatgctattcttgcaaggaaaagacagaggagtacattcaagcaagacgtctctacatt
gcggaattgcagaaaaggtatgaagcagcgttggaacgaaaattaaagatcatagagatt
atccgtgccctgaatcttccaaacaatcctttagatgacattgtcgatcagcttggaggc
cctgacaaagttgcagaaataacaggcaggcgaggtatgcttgtaagagcatctaatggg
aaaggcgttacgtatcaagcaagaaacacaaaggatatcacaatggaaatggtcaacatg
aacgagaaacaactatttatggatggtaaaaagtttgttgccattatttctgaagctggt
tcagctggtgtttcgttacaagcagatagaagggcaataaatcagaaaagaagggttcac
ttgactttagagcttccctggagtgctgatcgtgcaattcaacaatttggaagaactcac
cggtcgaatcagacatcggctcctgaatataggttactcttcacaaatctcggtggggaa
cgccgctttgcctctatagttgcaaagagactagaaactcttggtgctttaacacaggga
gaccgcagggctgggccatccgggccttctttgagtgcctacaattatgatagcaacttt
ggtaaaaagtccttgatggtgatgtatagaggaattatggagcaggagaaactacctgtt
gttcctcctggatgctcggttgatgaacccgaaacaattaaagagtttttgaccaaagca
agggctgcccttgttgcggttggaattgttagggacagtgttctagccaatgggaaagat
gttggaaagttttcaggacgcattattgattctgacatgcatgatgttggacgatttctg
aatcgcctcttgggattgccacctgatatccagaataggttgtttgaattgtttactagt
atattagacgttcttgtacataatgctcggatcgaaggaagttttgattcaggaattgtg
gatatgaaagctaatagtgttgagctgctgagcactccaaagaccgtccatgttgatcaa
atgtctggtgcctcaactatgctctttactttcactctggatcgtggtgttacatgggag
tctgcaagttcaatgctagaggggaagagaagggacggacttggttctgctaatgatggc
ttttatgaatctaaaagggaatggttaggaaaacgacacttcatattagcatttgagagt
gcggcttccgggttgtttaagattgttcgtcctgctgtaggagagtcaatcagggagatg
tctctttcagagttgaaaactaaataccgaaaactctcttctctggagaaggctcggact
ggttgggaagacgagtacgaaatttcttctaaacagtgtatgcatggacccaagtgtaag
ctgggcgagtattgcacagttgggcgaagaatacaggaagtaaacgttgtgggtggcctc
attcttccaatctggggaaccatagagaaagctctctcgaaacaatcccgtcatagccac
aagagagttcgagttatacgcatagagactacgacggacaatcagcggatagttggcctc
tctatacctaatgcagctgttgaaactgttttacaagatttagcatgggttcaagagatt
gatgattaa
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