Camelina sativa (false flax): 104714308
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Entry
104714308 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104714308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104714308
03036 Chromosome and associated proteins [BR:
csat03036
]
104714308
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104714308
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104714308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
104714308
NCBI-ProteinID:
XP_010429924
LinkDB
All DBs
Position
9:complement(35618636..35623532)
Genome browser
AA seq
1042 aa
AA seq
DB search
MTSVQPFRETSWMDGNLDSQKKRRISLGGVTALSEEITDSLPMLNSPDYFLKPCMLELVE
REIENPGYCSRVPDFTIGRIGYGYIKFLGNTDVRRLDLDQIVKFQRHEVIVYDDESSKPV
VGEGLNKAAEVTLIVNIPNLTTLGKVQVDHIAYKLRQSAERQGATFISFDPDNGLWKFLV
PHFSRFGLSDDEAEDIAMDDAPGLGDPVGLVGDKVADIVEEHQMETSEPELSHSLPAHLG
LDPRKMKEMRMLMFPNEDLNEADDFREQTSHHMASLTKQNVRPSQKISQRNSHQDTPPVL
RKTPLALLEYNPGNDKSSPGSILMVQQNKNLAVKKSKMGGFELDISHVTPLSDNYSRNVV
DAALFMGRSFRAGWGPNGVLFHTGKPICSSSSQMVLSSVVNKEKIAIDKVVWDRKEKVQK
ELIDSAFEAPLSLHKALKHDEEEVTFGSFSLKLQRVVTDRVVLSDICRHYIGVIEKQLEV
AGLSRSAKLFSMHQVMVWELIKVLFSDRQSTETLNYAASDNEEDMMQDVKEDSAEVNTEA
LPVIRRAEFSYWLQESVSHRVQEDVSDLNGSGYLEHLFFLLTGRELDSAVELAISKGDVR
LACLLSQAGGSTVNRNDILQQLHLWRRNGLDFNYIEKERIKLYELLAGNIHEALQDFTID
WKRFLGLLMWHHLPPDSSLPVIFRNYQLLLDQAKAPCPVPIYIDEGPADGFVSNKKRSDL
LYYLMLLHSKDEEEIDFLKTMFSAFSSTDDPLDYHMIWHHRGILEAVGAFTSDDLHILDM
GFVAQLLSQGLCHWAIYVVLHIPFREDQPYLHVIVIREILFQFCEIWSSMESQRQFIKDL
GIPSEWMHEALAVYYNYHGDFIKALDHFIECANWQRAHSIFMTSVAHSLFLSANHSEIWR
IATSMDDRKSEIENWDLGAGIYMSFYLLKSSLQEDADTMVELEPLESKNESCRSFVGRLN
ESLAVWGDRLPVEARVAYSKMAEEICDMLLSDLSNDPSRETQLSCFETAFDAPLPEDVRS
THLQDAVSLFSLYLSESGQISA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgttcaaccatttcgagagacttcatggatggatggtaatttggactcgcaa
aagaaaagaaggatctccttaggtggagttactgccctaagtgaagagataactgattca
ttgcctatgttaaattcacctgactacttcttgaagccatgcatgttggagttagttgag
cgagaaattgaaaaccctggttattgcagcagggttcctgatttcacaattggtaggatt
ggttacggttatatcaagtttcttgggaatacagatgttagaaggttagacctggatcag
atagttaagtttcaaaggcacgaggtgattgtttatgatgatgagagctctaaaccagtt
gttggcgagggacttaacaaggctgctgaggtgactcttatcgtaaacataccaaatcta
acaactttggggaaagtgcaagttgaccatattgcttataaattaagacagagcgctgaa
agacaaggggcaactttcatctcgtttgatcctgataatggtttatggaaatttttggtt
cctcatttcagcagatttgggttgagtgatgatgaggcagaagatattgctatggatgat
gccccaggtttgggagatcccgtaggactggttggtgacaaggtagctgatattgttgaa
gaacatcagatggaaacttccgagccagagctttctcactctcttcctgctcatctagga
cttgatcctagaaagatgaaagaaatgagaatgctgatgtttcctaatgaagatctaaac
gaagctgatgattttagagagcaaacttcacatcatatggcatccttgacgaaacaaaat
gtaagaccttcacagaaaatttctcaaagaaatagtcatcaagatactccacccgttttg
cggaaaactccgcttgctttactggagtataaccctggtaatgataaaagctcccctggt
agtatcctgatggtccaacaaaataagaatctggcagtgaaaaagtcgaaaatgggaggt
ttcgagctagacatcagccatgtaacgccattatctgataactattctcgaaatgttgtg
gatgcagcattgtttatgggaaggtctttccgagcaggttggggaccaaatggcgtcctt
tttcacactggtaagccaatatgtagctccagttctcagatggtattgtcttctgtggtc
aataaagaaaagatagcaattgacaaagtggtttgggatagaaaggaaaaggttcagaaa
gaacttattgattctgcattcgaggctcccttaagtctccacaaggcattgaagcatgac
gaagaagaagttacgtttggctctttcagtcttaaacttcagagagtggtcactgatcgt
gtagttctttcagatatctgccgacactatattggtgtaatcgagaaacagctagaggtt
gctgggttgtcaagatctgcgaagctgttttcgatgcaccaagtcatggtgtgggaactc
ataaaagttctcttttctgacagacagagtactgaaacgttgaattatgcagcttctgat
aatgaggaagacatgatgcaagatgtgaaggaagattctgcagaagttaatacagaagct
cttccagttatccgaagagcagaatttagttattggctccaagaaagtgtcagtcaccgt
gtacaagaagatgtgagtgatctaaatggttctggctacctggagcacttattctttctt
ctgactggacgagagcttgattcagcagtggaacttgccatatctaagggagatgttaga
cttgcttgtttgttgagccaggctggtggatcaactgtaaaccgcaatgatatcttgcag
cagcttcacctttggagaaggaatgggctggattttaattacatcgagaaggagagaatt
aagctttacgaattgcttgctggtaatatccatgaggcattacaagattttacaattgac
tggaagagattcctaggattgttaatgtggcatcatctacctccggacagttcattacct
gtcatcttcagaaattatcaactcctactagatcaggcaaaagccccgtgtcccgtcccg
atatatattgacgaaggacctgcagatgggtttgtaagcaacaagaagcgttctgacctt
ttgtattatcttatgcttctacacagcaaagatgaggaagaaattgatttcctgaagact
atgttcagtgcattctcttcaactgacgatccacttgactatcatatgatctggcaccat
cgaggaatcctagaagcagttggagctttcacttcagatgatcttcacattctcgatatg
ggatttgttgcacagcttctctctcagggcctttgtcattgggctatctacgttgtcctt
cacatacccttccgtgaagatcaaccatatctacacgtcattgtcattcgggaaatcctg
tttcagttctgtgaaatatggagttctatggaatcacaacggcaatttatcaaggacttg
ggtatcccttctgaatggatgcacgaagctctggcagtttactacaattaccatggagat
ttcataaaggctcttgaccactttattgaatgtgcaaactggcaaagagctcattccatt
tttatgacgtcagttgcccattcattatttttgtcagctaaccattcagaaatatggaga
attgctacttcaatggatgatcgcaaatctgagattgaaaactgggatttgggtgccggt
atatacatgtcattttatttacttaagagttcactgcaagaagatgctgatacgatggta
gaactggaaccccttgagagcaaaaacgagtcttgcagaagttttgtcggtcgtttaaac
gaatcattggctgtttggggtgacagattaccagttgaagctagagtggcatattcaaag
atggcagaggaaatatgcgatatgcttctgtcagatctaagcaatgatccaagtcgagag
acacagctaagctgctttgagacagccttcgatgccccattgccagaagatgtgagatca
acgcatctgcaagatgctgtgtcactattctcactatatctctcagagagcggccaaatc
tcagcttag
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integrated database retrieval system
