Camelina sativa (false flax): 104714385
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Entry
104714385 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit beta'-1-like
KO
K17302
coatomer subunit beta'
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104714385
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104714385
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104714385
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104714385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_Nup120_160
PEP5_VPS11_N
WD40_RFWD3
WD40_like
Beta-prop_Vps41
Beta-prop_SPT8
TPR_CcmH_CycH
TPR_2
Beta-prop_WDR35_TULP_N
TPR_8
WD_LRWD1
HEAT_GCN1
Beta-prop_DCAF12
TPR_12
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
104714385
NCBI-ProteinID:
XP_010430032
LinkDB
All DBs
Position
9:complement(35912650..35919141)
Genome browser
AA seq
923 aa
AA seq
DB search
MPLRLDIKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTMVKSFDVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHMKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE
LPIIITGSEDGTVRIWHATTYRLENTXNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKLG
REIPVASMDNSGKIIWAKHNEIHTVNIKSVGTDEVTDGERLPLAVKELGTCDLYPQSLKH
NPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEHAVRESSTKIKIFSKNFQE
KKTVRPTFSAEHIFGGTLLAMCSSDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIA
SESSFYILKFNRDIVTSYFDGGKQIDEEGIEDAFELLNETNERVRTGLWVGDCFIYTNSS
WRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNIIGYTLLLSLIEYKTLVMR
GDLEQANEVLPSIPKEHHNSVAHFLESRGMIEDALEVATDPDYKFELAIQLGRLSVAKDI
AVEAQNESKWKQLGELAMSTGKLDMAEECMRQAMDLSGLLLLYSSLGDADGLVKLAALAK
EQGKNNVAFLCLFMLGQIEDCLHLLVESNRIPEAALMARSYLPSKVSEIVALWRNDLTKI
SPKAAESLADPEEYPNLFEDWQVALSLENRAAETRGVHPPAGQYCSHADRDRTTLVEAFR
IMQIEEEGRLEQGDVLNEVGEEGEEGEGEEEEEEEDHQEESSDGRQQSVEEEAVVVDADS
TDGAVLVNGNESEEQWVLTPPQE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagacttgatatcaagcgcaaatttgctcaaagatcagaaagagtcaaatct
gtagatctccatccaacagagccatggatcctggcaagtttgtattccggaactgtgtgc
atatggaattatcagacacagacaatggttaaatctttcgacgtgactgaattgcctgtt
cgctcagctaagttcattgcacggaagcagtgggttgtagctggagctgatgacatgttt
attcgtgtctacaactacaacactatggataagatcaaagtatttgaggctcatgctgat
tacattaggtgtgttgctgttcatcccacccttccctatgtcttatcatcatctgatgat
atgctcatcaagctttgggactgggaaaagggttggctttgcactcagatttttgaaggc
cattcccattatgttatgcaagtcactttcaatccgaaagataccaatacttttgctagt
gcatcccttgaccgtaccattaaaatatggaatcttggttctccggatccaaattttact
ctggatgcacatatgaaaggcgttaactgtgtagactactttactggtggggataaacca
tacctaatcactggatctgatgatcatactgctaaggtgtgggattaccaaacgaagagt
tgcgttcagacacttgaaggtcatacacacaatgtttctgcggtatctttccatccagag
ctcccaataattattacaggatctgaggatggaactgttcgcatatggcatgccaccact
tacaggcttgagaatacgtagaactatggccttgagagggtttgggctataggacacatt
aaagggtcacgccgggttgtaatcggttatgatgaaggatccataatggtgaaacttggc
cgtgaaataccagtggctagtatggataacagcggaaaaattatttgggctaaacacaat
gagatacatactgtaaacatcaagagcgttggcacagatgaggtcactgatggtgagaga
ctgcctttggctgttaaagagctagggacctgcgatctttatcctcaaagcttgaagcac
aaccctaatggtaggtttgtggttgtttgtggagatggtgagtatatcatctacactgcc
ttggcgtggcgaaataggtcatttggctctgcgctggaatttgtttggtcatctgatggg
gagcatgctgtcagggaaagctcgacaaagatcaagatcttcagcaagaatttccaggaa
aagaagactgtgagacctactttctcagcagagcacatttttggtgggacattattggca
atgtgctcaagtgattttatctgcttctatgattgggctgaatgtcggttgattaggcga
atagatgttactgtcaaaaatctttattgggcagacagtggtgatctcgttgccattgcc
agtgaatcatcattctacatccttaagttcaatcgcgacattgttacctcttattttgat
ggcggtaaacaaattgatgaggaaggcattgaggacgcatttgagcttctcaatgaaacc
aatgaacgtgttcggactggcttatgggttggagattgttttatctataccaattcgtct
tggaggcttaactactgtgttggtggtgaggtaacaacaatgtatcatctggaccgtcct
atgtacttgttgggttatctcgctaatcaaagccgggtttatttgattgacaaagagttc
aacattattggttacactttacttttaagtttgatcgagtacaagactcttgtgatgcgt
ggagatttggaacaggctaatgaagtcttaccttcaattcctaaggagcatcataatagc
gtggcacactttctggaatcacgtggtatgatagaagatgctctagaagtagctactgac
cctgattacaaatttgagttggcgatacagctcggtagattgtcagtcgccaaggacatt
gctgtagaggcacaaaatgagtctaaatggaagcaacttggagaattagctatgtccact
gggaagttggatatggctgaggaatgcatgaggcaagctatggatttgagtggcctgttg
ttgctttattcttcattgggagatgcagatggattggtgaaactggcagcacttgctaaa
gagcaaggaaagaacaacgtcgcttttctttgcttgttcatgttgggtcaaatagaagat
tgcctgcatctgttggtggaaagtaatcggatacctgaagccgctctgatggcacgatcg
taccttccgagcaaggtctctgaaatagtggcattgtggagaaacgatttaaccaagata
agtccaaaggctgctgaatctctggctgatcctgaagagtatcccaatctctttgaagac
tggcaagtcgccctgtcccttgaaaatagagctgcagagacaaggggcgtccatcctcct
gctgggcagtactgtagtcatgcagacagagatcgtacaactttggtggaagcttttaga
ataatgcaaatagaggaagaggggcgactagagcaaggggatgttctcaacgaggttggg
gaagagggggaagagggagagggagaagaagaggaggaggaggaggatcatcaggaagaa
agtagtgatgggaggcaacagagtgtggaagaagaggctgttgtggtggacgctgactct
acggatggggctgtgctagtaaatgggaacgagtctgaagaacagtgggttctaacaccg
ccacaggagtag
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