KEGG   Camelina sativa (false flax): 104714418
Entry
104714418         CDS       T05044                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
csat  Camelina sativa (false flax)
Pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104714418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104714418
Spliceosome [BR:csat03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104714418
 Complex B
    104714418
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 104714418
NCBI-ProteinID: XP_010430076
LinkDB
Position
9:36057867..36062047
AA seq 610 aa
MMSYEGNGDGVAVSTAINNSNNNEDYIALKSSPFQSLGGEDGHEDSKSREESDDLEKDSS
RSKEKDKENGRDKDRDKDKDREREKSRDRGREKSRDRDRDREKSKDRERDRHHRDRHRDR
SRERSEKRERERDDLDDDHHLHRRSRDRDRRSRDRDREERHRRRSRSRSRSRSERRSRSE
HRHRSEHRSRSRSRSRSRSKSKRVSGFDMAPPASAMLAATAVAAAAGQVPSVPLPTAATI
SGMFSNMFPMVPGQQLGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVM
SAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDY
NPSLAASLGPSQPNPSLNLAAVGLSSGSTGGLEGPDRIFVGGLPYYFTETQIRELLESFG
PLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAVQPK
PEQEEILLHAQQQIAFQRLMLQPGGTPTKIVCLTQVVTADDLRDDEEYADIMEDMRTEGG
KFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARLGMNGRKFGGNQVVAVYYPE
NKYAQGDYED
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgatgagttacgaaggtaacggagatggcgtcgctgtctccaccgcaatcaataacagc
aacaacaacgaggactacatagctctgaagagttcgccttttcagtcccttggtggcgag
gatggtcacgaggactccaagtctcgagaggaatctgatgatcttgaaaaggattcttca
agaagcaaggagaaagacaaggaaaatggacgtgacaaagacagagacaaagataaggat
cgtgaaagggagaagagcagagacagaggtagggagaagagcagagatagagacagagat
agggagaagagtaaggatagggaacgagaccgccatcatagagatcgtcatagggaccgt
agcagagaacgtagtgagaaaagggaacgtgagagagatgatttggatgatgatcatcat
cttcatcgcagaagtcgagaccgtgacaggaggtctcgcgatcgagacagagaggagagg
cacaggcgacggtcacgctctcggtcaaggagccgctctgaacgtaggtcaaggtcagaa
cataggcataggtctgaacatagatcacgttctcgctcacgatcacggtcaagatcaaag
agcaagagggttagtggatttgatatggcgccccctgcttctgcaatgttagctgctact
gctgttgctgctgcagcaggccaggttcctagtgtcccactcccaactgctgctactatt
tcagggatgttctccaacatgttccccatggtccctggtcagcaacttggcgctcttcct
gtgatgccggttcaggcaatgactcagcaggcaactaggcatgctcggcgagtctatgtt
ggtggccttccaccaactgcaaatgaacagtcggtggcaacgttctttagccaagtgatg
tcggccattgggggaaataccgctgggccaggtgatgcggtggtcaatgtttatataaac
catgaaaagaaattcgcttttgtggagatgagatctgttgaggaggctagtaacgcaatg
gcattagatggcattatattagagggagttcctgtaaaggtgaggaggccaactgactat
aacccgtcccttgctgcatctcttggtccgagccagcctaatcccagcctcaacttggcg
gctgttggattgtcttcggggtctactggtgggcttgagggtcctgaccgcattttcgtg
ggcgggcttccttattacttcacagagacacagatcagggagcttttagagtcttttggg
cccctaagaggtttcaacttggtcaaagacagggaaactggaaattcgaagggatatgcg
ttctgtgtttaccaagatccttcagtaacagatattgcatgtgctgctctaaacggaatt
aagatgggcgataagacacttacagttaggcgtgcaatccagggagcagttcaacctaaa
cccgagcaagaagaaatcttactacatgcccaacaacagattgcttttcagaggcttatg
ttacaacctggaggtactcccaccaagattgtctgtttgactcaagtggttacagctgat
gatcttagagacgatgaagaatatgcagacataatggaggacatgagaacagaaggtgga
aaattcggtaacttggtgaacgttgtgattccaaggcctaatccagatcatgatccaaca
ccaggagttggaaaggtattcttggagtatgcggatgtggatggctcatcaaaggccaga
ttggggatgaacggaagaaaatttggaggaaaccaagtggtggctgtgtattaccctgaa
aacaagtatgcgcaaggcgactacgaagattga

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