Camelina sativa (false flax): 104715110
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Entry
104715110 CDS
T05044
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104715110
03036 Chromosome and associated proteins [BR:
csat03036
]
104715110
Transcription factors [BR:
csat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
104715110
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
104715110
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
HMG_box
Rttp106-like_middle
HMG_box_2
HMG_WDHD1
CDC45
Motif
Other DBs
NCBI-GeneID:
104715110
NCBI-ProteinID:
XP_019085434
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All DBs
Position
9:8010379..8016703
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AA seq
736 aa
AA seq
DB search
MTDGHSFNNISLSGRGGTNPGLLKINSGGIQWKKQGGGKAVEVDKSDIVGVSWMKVPKTN
NQLGVKTKDGLYYKFIGFRDQDVASLTSFFQSSYGTTPEEKQLSVSGRNWGEVNLNGNTL
TFSVGAKQAFEVSLADVSQTQLQGKNDVILEFHVDDTAGANEKDSLMEIGFHIPNSNTQF
VGDENRPPAQVFNDEIKLMADVTAGAEEAVVTFESIAILTPRGRYSVELHLSFLRLLGQA
NDFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDAVVESELSI
SNDLMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSAQDGFAVKSSLKAED
GVLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGSNMHYFDLXPPIRKGQTMYPHIV
MQFETDAVVESELSISNDLMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRS
AQDGFAVKSSLKAEDGVLYPLEKGFFFLPKPPTLILHDECSSKGLKIMNLGGAGSADGGV
AAVLGDNDDDDAVDPHLERIRNQAADESDEEDEDFVMGEDDDGGSPTDDSGEDDSDASEG
GGGEKEKSIKKDLKREASSSSKGLPPKKKVLATDEGSSKKKKQKKKKDPNAPKRAMSGFM
FFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSAEEKEPYEAKAQVDKQRYKDEISDYK
NPQPMNVDSGNESDSS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccactccttcaataacatctctctcagcggtcgcggcggaacgaaccct
ggccttcttaagattaactctggaggtattcaatggaagaagcaaggtggtgggaaagct
gtggaagttgacaaatctgatattgtaggtgttagttggatgaaagttccaaagactaat
aatcagttgggggtcaaaaccaaagatgggttatactataagttcattgggtttcgggat
caggatgttgcaagtctgaccagctttttccaaagtagttatgggacaacacctgaagag
aaacagttatctgttagtggtcgaaattggggagaggttaatttgaatgggaatactctc
accttttcggttggtgcaaagcaagcttttgaagtatccttagctgatgtttcgcagact
cagcttcaaggaaaaaatgatgtcatattggagttccacgttgatgacactgctggtgcc
aatgagaaagactcactgatggagataggttttcatattcctaattccaacacccagttt
gttggtgatgaaaaccgtccgcccgctcaagtttttaatgacgaaatcaagttaatggct
gatgttactgctggagctgaggaggcggtcgtcacattcgagagtattgcaatcctcaca
cccaggggtcggtacagtgtggaacttcacctttctttcttacgtttgctaggacaagct
aatgactttaaaatccaatacagtagtgttgtccgcttgttcttgcttcctaagtcaaat
caaccacacacatttgttgttatctctctagacccaccaatccggaaaggtcagacaatg
tacccccacattgtgatgcagtttgagactgacgccgttgtagaaagtgaactgtcaatt
agtaatgatcttatgaatacaaagttcaaggacaagctggagcgatcatataagggtctc
attcatgaagtattcaccaccgtgttgcgttggctgtctggtgcaaagatcactaaacca
gggaagttccgcagtgcccaagatgggtttgcagtgaaatcatctctgaaggcagaagat
ggggttctttatccacttgagaagggctttttctttttacctaaacctccaacgcttata
cttcatgatgagattgactatgtggagtttgaaaggcatgctgctggtggttctaacatg
cattacttcgatcttnacccaccaatccggaaaggtcagacaatgtacccccacattgtg
atgcagtttgagactgacgccgttgtagaaagtgaactgtcaattagtaatgatcttatg
aatacaaagttcaaggacaagctggagcgatcatataagggtctcattcatgaagtattc
accaccgtgttgcgttggctgtctggtgcaaagatcactaaaccagggaagttccgcagt
gcccaagatgggtttgcagtgaaatcatctctgaaggcagaagatggggttctttatcca
cttgagaagggctttttctttttacctaaacctccaacgcttatacttcatgatgagtgc
agctccaaaggtttgaagattatgaaccttggaggtgccggaagcgcagacggaggtgtt
gctgctgttcttggggataatgatgatgatgatgctgttgacccccatcttgagcgtatc
agaaaccaagctgctgatgagagtgatgaggaggacgaagactttgttatgggtgaggat
gacgacggtggttcaccaactgatgattctggcgaggacgactctgatgctagtgaaggc
ggcggaggagagaaagagaaatctatcaaaaaggatctcaagagagaagcttcatcatct
tcgaaaggattgcctcctaagaagaaagtgttagccacagatgaaggcagtagtaagaag
aagaagcagaaaaagaagaaagatcccaacgcaccaaaaagagcaatgtctggtttcatg
ttcttctctcaaatggaaagagataacataaagaaggaacacccgggaatagcatttgga
gaggtgggaaaggtgcttggagataagtggcgtcaaatgtctgctgaggaaaaagagccg
tatgaagccaaagcccaagttgacaagcagcgttacaaggatgagattagtgattacaag
aaccctcaaccgatgaacgtggactcaggaaacgagtccgacagttcctaa
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