KEGG   Camelina sativa (false flax): 104715410
Entry
104715410         CDS       T05044                                 
Name
(RefSeq) histone deacetylase 7-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03082  ATP-dependent chromatin remodeling
csat03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104715410
   03083 Polycomb repressive complex
    104715410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csat03036]
    104715410
Enzymes [BR:csat01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104715410
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     104715410
   HDAC complexes
    Sin3A-HDAC complex
     104715410
    BRAF-HDAC complex
     104715410
    REST complex
     104715410
    SHIP complex
     104715410
    MiDAC complex
     104715410
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     104715410
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104715410
  Chromatin remodeling factors
   NuRD complex
    104715410
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 104715410
NCBI-ProteinID: XP_010431120
LinkDB
Position
9:complement(18583137..18584874)
AA seq 418 aa
MENAASLATGPDGRKRRVSYFFEPEFGQPREPYASHIANSLIFKHGLHRHMEIYRPILAG
VSDFLRFHSRDYIDFLASITPMTLNDPSFFHNLRRSRFFSNDVYMDREMNGPVFHGLFDY
CRAYAGCSLTAAAKLNRRETDIAINWSGGMHRAKFDQATEFCFVNDIVLAILELLKTFKR
VLYIDIGYRRGDGVEEAFYDTDRVMTVSFHTDWDTFAFFPRYGGRRELYGDRRELYSLNA
PLKDCLKDKSLRNLFRPVITKAMEVYQPEVVVLQCGADSLADNWPGRFNLKIKGHGDCLQ
FVRSFNVPLMVLGGGGSEPRFVSRCWCYETAVAVGVGEQLENDLKVNEFFYKPNFKQDLN
TPRDIEILRNGLLRKLSQLIHVPSVQFQDTPSMRQATEPAEVDMEKRQVLSNLRRSKL
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggaaaacgcggcgagcttagcgacgggtcccgacggacgtaaacggcgggtgagttac
ttcttcgagccagagttcgggcaaccaagggaaccctacgcgagccatatcgctaacagc
ctcatcttcaaacacggcctccaccgtcatatggaaatctaccgcccaatcctcgccggc
gtttccgacttcttgcggttccactcgcgggactatatcgatttcctcgcctccatcacg
ccgatgactctaaatgatccttccttcttccataacctcaggcgctcgcgcttctttagc
aatgacgtgtacatggacagagagatgaacggtcccgtcttccatggccttttcgattac
tgccgtgcctacgctggttgttctttaaccgccgccgccaaactgaaccgccgagaaact
gatatcgctatcaattggtccggagggatgcaccgtgccaagtttgatcaggctactgag
ttttgcttcgtcaatgacattgttcttgcgattctcgagttgcttaagactttcaagaga
gttctgtacatagatattggctatcgccgtggggatggagtggaagaagcattttacgat
actgatagagttatgactgtttctttccacactgattgggatactttcgcgtttttccca
agatacggaggcaggagagagttgtacggagacaggagagagttgtattctctgaatgca
ccgttaaaagattgcctcaaggataaaagtcttcgcaatttgttcagacctgttatcacc
aaggcgatggaagtctatcagccagaagttgttgttcttcagtgtggtgctgattcatta
gctgataattggcctggtaggttcaacttgaaaatcaagggtcacggtgattgcctccag
ttcgtaagatcttttaatgttcctctcatggtcttgggtggtggaggttctgaacctcgc
tttgtttcccgctgctggtgctacgagacagctgttgcggttggggttggggaacaactt
gagaacgatctcaaagtcaacgagtttttttacaagccaaacttcaaacaagatttaaac
acaccaagagatattgagattctaaggaacggattgctacggaaactttcacaactaata
cacgtacctagtgtacagtttcaagacactccatcaatgcgtcaagccacagaaccggcg
gaagtcgacatggagaagagacaagttctaagcaatttgaggcgatccaagctgtga

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