Camelina sativa (false flax): 104715673
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Entry
104715673 CDS
T05044
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
csat04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104715673
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104715673
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104715673
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104715673
03036 Chromosome and associated proteins [BR:
csat03036
]
104715673
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104715673
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104715673
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104715673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
VGLL4
DUF6724
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
104715673
NCBI-ProteinID:
XP_010431366
LinkDB
All DBs
Position
9:complement(24681714..24684284)
Genome browser
AA seq
489 aa
AA seq
DB search
MFNKIIKLGQKKFNKSDQHHQDNNNPSTNNVVRSSRTAPTTASSVSNGESQTTASSPSQT
PNHPMFTTTPTLEVLPLLKDVSSSDRPLLFMKKAHMCSCHCDFSDTLIMPREKEIKRQTL
LELVDFLHSSSGKVNETMQSELIRMVSANIFRCLPPAHHENTGAPPEGNDPEEEEPYLEP
WWPHLQLVYELLLRYVVSSEIEPKTAKKFINHTFVSRLLDLFDSEDPREREYLKTVLHRI
YGKFIFHRPFIRCSIYNVFYKFLYETERCIGVGELLEILGSVINGFTVPMREEHRLYLVK
AILPLHKSKSISIYHQQLSYCVTQFVEKDYKLADSVIRGLLKFWPLTNCQKEVLFLGELE
EVLDATEPSEFQQCVVPLFTQIGKCLNSAHFQVAERALFLWNNEHIVGLIAQNKDVIFPI
IFEALERNMKGHWNQAVHGLSENVRRMFLEMDTDLFEENYKCLPMMTICFLTTPDSYFFN
EDTDFDLDL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaaatcattaaactgggtcagaaaaaattcaacaaatcagatcaacaccac
caagataacaacaacccttccaccaacaacgtcgtccgcagcagccgcaccgcacccacc
accgcatcctctgtttctaatggcgagtctcagacaacggcttcttctccttcacagaca
ccaaaccacccaatgttcacaacaacgccgaccctcgaagtgcttcctctgttaaaagac
gtgtcttcctcagatcggcctctcctcttcatgaagaaggctcacatgtgttcttgccat
tgtgatttctctgatactctgatcatgccacgtgagaaagagatcaaaaggcagacgctt
cttgaattggttgatttccttcactcttcctctggtaaagtcaatgagacgatgcagagt
gagcttatacgtatggtttcagctaacattttccggtgtctcccacctgcgcatcatgag
aacactggagctcctcctgaagggaatgatcctgaagaagaagagccttatcttgagcca
tggtggcctcatttgcagctcgtttacgagcttcttttgcgttacgttgtgtcttccgaa
atcgagcctaagactgcgaaaaagttcatcaaccacacctttgtctcgaggttacttgat
ttgtttgactctgaggatcctagggagagggagtatttgaaaactgtgcttcataggatc
tatggcaagtttatatttcaccgcccttttatcaggtgttcgatttataacgttttctac
aagttcttgtatgagactgagaggtgcattggtgttggtgagttgttggagatcctaggg
agtgtgatcaatgggtttacagtacctatgagagaggagcataggttgtatcttgtgaaa
gctattttgccattacacaagtctaagagtatctccatctaccaccagcagttgtcgtat
tgcgtgacacagtttgtggagaaagattacaagttggctgattccgtgatccgaggcttg
ttgaagttttggccgcttacgaattgtcaaaaggaggttttgttcttgggagagttggaa
gaagtcttggatgctacagagccctctgagtttcagcaatgtgttgttcctctctttact
cagattgggaaatgtcttaatagcgcacacttccaggtggcagagagagctcttttcttg
tggaacaatgaacatatcgtaggcttgattgctcagaacaaagacgtgatcttccctata
atatttgaagcattggagaggaacatgaaaggacattggaaccaagcggtgcacggtcta
tctgagaacgttagaagaatgtttcttgagatggacactgatctctttgaggagaactac
aagtgtttaccgatgatgacgatatgtttcttaactactcctgactcatatttttttaat
gaagacactgattttgacttggacttgtag
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