Camelina sativa (false flax): 104715901
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Entry
104715901 CDS
T05044
Name
(RefSeq) protein LST8 homolog
KO
K08266
target of rapamycin complex subunit LST8
Organism
csat
Camelina sativa (false flax)
Pathway
csat04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
104715901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104715901
Membrane trafficking [BR:
csat04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
104715901
mTORC2 complex
104715901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_RIG_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
eIF2A
Beta-prop_NWD2_C
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_WDR19_1st
VID27
MIOS_WD40
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
104715901
NCBI-ProteinID:
XP_019085764
LinkDB
All DBs
Position
9:complement(32410927..32412796)
Genome browser
AA seq
319 aa
AA seq
DB search
MNHGRPVILATASHDHTIRLWEAQTGRCYLDFDYYDPALVPVGQLHVNKHVNRLEITPDR
RGLLAACNPHILLFDLNSIDPHIPVRTFVSHTNNVVAVGFQYTGNMMYSGSEDGSVKIWD
LRVRGCQREFINDSPVNTVVLHPNQTELISGDHNGNIRVWDLRANSCSCELVPEAGTPIR
SLSVMLDGTTVVAANNRGTCYVWRSLRGIQTMTEFEPLHKLQAHNGYILKCLLSPENKYL
ATASSDKTVKIWNVDGFKLEKVLTGHRRWVWDCDFSVDGEYLVTASSDTTARLWSMRAGR
EVKVYQGHRQATVCCTVRD
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatggtcgtcccgtgattcttgcaacggctagccatgatcataccatccgatta
tgggaagcccaaaccggtcgttgttaccttgactttgactactatgatcctgctttggtg
cctgtgggtcaattgcatgtaaataagcatgtaaataggcttgagataaccccagatagg
cgtggactattagcagcttgcaatcctcacatactactcttcgatctcaattccatcgac
cctcatatacctgtgaggacttttgtatcacacaccaacaatgttgtggcagtaggattc
cagtatactggaaacatgatgtattcaggatcagaagatggctcagttaagatctgggac
ttgagggttcggggatgccaaagggagtttataaatgattcaccagttaacacagttgtt
ttacacccaaatcagactgaattgatatctggagaccacaacggcaatatacgtgtatgg
gatctcagagcaaattcgtgtagctgcgaactggtacctgaagctggtacacctatacgg
tctttatccgttatgttggatgggacaacggttgttgctgctaataaccgtggaacttgt
tatgtatggcgctcattgcgtggaatacaaacgatgacggagtttgagccccttcataag
cttcaagctcataatggttacatccttaaatgtctcctttctcctgaaaacaaatatcta
gcgaccgcatcatctgacaaaactgtcaaaatatggaacgttgatggtttcaaactagag
aaagttttaacaggacatcgaagatgggtctgggactgcgacttctcagttgatggagaa
tatcttgtaacagcatcatcggacaccacggctagattgtggtcgatgcgagcgggaaga
gaagtgaaggtgtaccaaggtcatcgccaagccactgtgtgttgtacagtccgtgattaa
DBGET
integrated database retrieval system