Camelina sativa (false flax): 104716157
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Entry
104716157 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104716157 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104716157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104716157
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104716157
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
104716157
NCBI-ProteinID:
XP_010431823
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Position
10:complement(229102..239991)
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AA seq
1962 aa
AA seq
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MANPKSVDASLWWDPFDSLLTELENASLSDDLPQFIAKKLEENHAWFVGSVSMFKSPSEK
SKEALNSQVVKIKEHQLVIKPELKDKALRISSHLNLDEIQSYILVERSMDQEYGTTDSVA
QDFIDVILLQYYMERQCLLKCTKRILIHSLYAAREESAIREEAVKLISDGLESRQSSVLE
DLLSSCFPQNMDVNLFTLWAEETLIEDNLILDILFLLYHESFCTCNGERWRKLSSFYKGI
LSGSYNFRKLAVSAEAQHSACRVQILLLMILIDTLDMENLLQMVHDEVPFRSGTCVFSIV
DVQEMDATISSLNTFEVKEAGPLVLAWAVFLCLISSLPGKEEIPFLLQDIDHVSYVQQAI
EAASLSYFLEILQSNVLNDFDGPVSGYRSVLRTFISAFIASYEINFQLDEAILELILDIL
CKVYQGEESLCNQFWDRKSFVDGPIRCLLFDLESEFPFRSTEFIRLLSSLSEGSWPAECV
YNFLDKSVGVSTLFDITSDSPTDDACQLVETSRPVHIPGLEGLVIPSNTRGRILRIISEN
TGLVRWEYPLSGIIVLIIRLANGLYIGNNREAFVTLELLRRMVTFNKAVCFSLLNISHFF
YDHESYVNGEMESDVRVVDIICNSVRSLTCDTGGAAVMAMAVDILAKLLRCSPSNVAPMV
LKANIFDITSGSDVPDSGYNISLSGTWSLSGKLAKMILIDCEKNDTSCPLVISVLEFTMQ
LVERGLENDVVFGLVVFSLQYILASHEYWKYNHGNMRWKVTLKVIEVMKTCLRFSKLSTK
LRDVLLDILLHDASVHSALFRIICTTTQTLENLCSSRFVEHAEIEGWQLAIVSVLDVLNV
TLSQFSESTHSALPVFHQAMLSSTTKPIPVVAAVTSLISYFRNPTIQVSAARVLSKLFAL
AESSQLYIVSNAGFGLDNKQITDLRNSVTEIVLDLSGQNEDLVMATLKLLTVAARYQPAL
LVAIFDSNEDSDAGNLNQSGKDASSIPDRACKSRLLHTILQYVERATDFVDRYPNILLGL
LDFLKTLWQEAGQYANMLEQFKASKKLWQQLSNIISQASKLKDSTVGSLGNKEISKLFVK
YQCQSSVLEIMACNMFLYKKLLFAESLKKPCVELKEKKNTAVSPPKITWSADSDPKDIFS
KWCDESVLDGLIQSVSSLDAKSEINFQAKVAAVLLIVHLIVKLEASGAGALSIVLVGKLK
LISEILCAQPAFSELLAQYSKLGYSGGKELMPMIFSDLYCHLQGKLEGRDIPTGPFKELF
QFLLESSFWETYKQKTNADVNMASGDCLFDTEQIRAELGIDIWDFSEWKTSKTTAEEMLS
YMQRENSMVLLSTSQLSVLHALISVLILYEDNSLEETAAVERKIPSRVTLSSIDGVSQKF
YTTVDSLASLWDAPKIVFDILTAQADLLSRLLKSAKKNLSLSICALVLRNVGPGLKILGS
LRHSNAILKKTINLLLEVLLLVVGFGSENSNSSGMGHMVPAKDFTEISDATIGLLPLLCN
FMGNPEYMALCLTAVDLILRNFLTPETWFPIIQNQLRLQHVILQLQDKKSTASVSAILKF
FLTIAQVHGGAQMLLNSGFFSTLRALFVEYPDGMSTLVSDNEKGSLLEKTEKPQHIWGIG
LAVVTAMVHSLGSGSAGADIVESVISYFFLEKGYMISYYLAAPDFPSDDRDKVRPRSQRT
WTSLAYLRETEHTLLLMCALASHWRLWVKIMKGMDSPLREMTIHLLAFISKGAQRLRESQ
SQTSHLLCPPVVKEEFDSCKRRSFINSKHGWFALAPIVCVGKPKITAVSISTALVIRGHT
AEHPGSVTQSQFSDSVAIQIYRVASVLLKFLCLQAEGAVERAEEVGYVDLAHFPELPEPE
ILHGLQDQATAIVAELCDNYRSKEVPDEVKKLCLLLIQTTEMSLYLELCVVQVCRIHPVF
GRVDSFSKDLKKLVKAAEVHAYLELSMDSLKKIAVFLYPGSL
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccctaaatccgtcgatgcatctctctggtgggatccgtttgactctcttctc
accgaactcgagaatgcttctctctctgatgaccttcctcaattcatcgcgaagaagttg
gaggaaaaccacgcgtggttcgtcggaagtgtgtcgatgttcaagtcaccgagtgagaaa
tcaaaagaagctttgaattcgcaagtggtcaagattaaggagcaccagttggtgataaag
cccgaattgaaagacaaagcacttcgaatcagctctcatctgaatctagatgaaatccaa
tcttacatcctcgtggaaagatctatggatcaggaatatggaactacggactccgttgct
caagatttcattgacgtgatactgcttcagtattacatggagcgccagtgcctactaaag
tgtacaaagcgtattctcatacattccttatatgcggcaagagaggaaagtgcaatcagg
gaggaagctgtaaagctgatctcagatgggcttgaaagtcgacaatcatcagttcttgag
gaccttttgtcctcttgttttccacagaatatggatgtcaatctattcactttgtgggcg
gaggaaacactaattgaggacaatttgattttggatattctcttccttctttaccatgaa
tcattttgcacttgtaatggagaaagatggagaaaattgtcttccttctataaggggatt
ctttcaggttcatataattttagaaagctggctgtgtcagctgaagcacaacattctgca
tgtcgtgtgcaaattctgttgctgatgattcttatagacacgttggatatggagaatctg
ttacaaatggttcacgacgaagtacctttcaggtctggaacttgtgtcttttccattgtt
gatgtccaagagatggatgcaacaatctcaagcctcaacacttttgaagtaaaagaagca
ggacccctcgtcctggcatgggcagtctttctgtgtcttatatcatctcttcctgggaag
gaggaaattcctttcctgctgcaggacattgatcacgtgagctatgttcaacaagctatc
gaggcagcatctttgagttatttccttgaaatccttcaaagtaatgtgttgaatgatttc
gatggaccagtctctggttatcgtagtgttttgaggacttttatttcagcatttattgcg
tcttatgagatcaattttcagctggacgaagccatcctcgagttgatactggacatcctc
tgcaaggtttatcaaggagaggagtcactctgtaatcagttttgggatcgaaaaagtttt
gttgatggccctatccggtgtctcctctttgatctggagagtgaattcccattcagaagt
actgaattcattcgtctcttgtcgtccctgagtgaaggcagttggcctgctgaatgtgta
tacaactttctggacaaatcagtgggggtatcaactttatttgatattactagtgactct
ccaacggatgatgcctgccaacttgttgaaacttcccgaccggtgcatattccaggtctt
gaaggtttagttattcccagcaatactcgtggaagaattctgagaataatcagtgaaaat
actggccttgtacgctgggagtatccgctatccggcataattgtgttgatcatccgtttg
gccaatggcctctacattggtaacaatcgtgaagcttttgtgactctagagctgcttcgt
cgaatggtgacatttaacaaggctgtatgtttctccttactgaatatcagccacttcttt
tatgatcacgaatcttatgtgaatggggagatggaaagtgatgtgagggtggttgatata
atttgcaattcagtcagaagcctgacgtgtgacactggtggtgcagctgtgatggcaatg
gctgtagatatcttagctaaacttctgcgatgttccccttcaaatgttgctcccatggtc
ttaaaggcaaatatatttgatataacttcaggttcagacgtccctgacagtggctacaat
atttcattgagcggaacatggtcgctctccgggaaacttgcaaagatgatcttgattgac
tgcgagaagaatgatacaagctgcccactggtcatatcagttctggaatttacaatgcaa
cttgtggagagaggactagaaaatgatgtagtttttggtctagtcgttttttcgttacag
tatattcttgctagtcatgagtattggaaatacaatcatggaaatatgcgttggaaagtg
acactaaaggtcattgaggtgatgaaaacatgtctcagattcagtaagttgtccacaaag
ctgagggatgttctccttgatattttgctgcatgatgcctctgttcacagcgcactattc
cggatcatttgtacgactacacaaactttagagaacctttgttcaagccgttttgttgaa
cacgcagagattgaaggatggcaacttgctatagtctccgttttggatgttttgaacgtc
actctctcccaattttctgagagtacacattctgctctccctgtatttcatcaagccatg
ctgtcctctacaacaaaaccgatcccagttgttgcagctgtcacatcactgatttcttat
ttccgtaatcctacgatacaggtttctgctgctagagtgctgtcaaagttatttgcctta
gcagaatcatcacaactctatatagtaagcaatgcaggctttggtctagacaataaacag
attacagatttaagaaattcggttaccgagatcgtacttgatctgtcgggacaaaatgaa
gatctagtcatggcgaccttgaaactactaactgtggcggcaagatatcagcctgctctt
ttagtcgccatatttgattcaaacgaagactcagatgctggcaacttaaaccagtccggc
aaagatgcctcctcaattcctgaccgggcttgtaaatctcgcttattgcacactatcctg
caatacgtagagagagcaaccgattttgttgatagatacccaaatatattactgggttta
cttgatttcctgaaaaccctttggcaagaggctggccaatacgcgaatatgctggaacag
tttaaggcatcaaaaaagttgtggcagcaactttccaacattatatcacaagcgtctaag
ctaaaagattcgacggttggaagtttaggcaataaagaaatttctaaattgtttgtgaaa
tatcagtgtcagtcttctgttttggaaattatggcttgcaacatgtttttgtacaagaaa
ttgctgtttgcggagtcactgaaaaagccatgtgtggagctgaaagagaagaaaaatact
gcagtatctccacccaaaataacttggtcagctgattcagatcccaaggatatcttttca
aaatggtgtgacgaatctgttttggatgggcttatccagtcagtttcttctttagatgct
aaaagtgaaataaacttccaagcaaaggttgctgccgttttacttattgtacatttgatt
gtgaaactggaagcatctggcgctggagcattgtctatcgttttagttgggaagctcaaa
ctcatatcagaaattctttgtgctcaaccggctttttctgagttgttggcgcaatattca
aaacttggttatagtggaggaaaggagttgatgcctatgattttcagcgatctatactgt
catctacaaggaaaacttgagggtcgtgacatcccaactggtccattcaaagagcttttc
cagtttctacttgagtctagcttttgggagacatataaacagaaaactaatgcggacgta
aatatggcttcgggggactgtttgtttgacactgagcaaataagggctgaattaggtatt
gatatatgggatttctctgagtggaagacatctaaaacaacagcagaggaaatgttgagt
tacatgcagagagaaaactcgatggttttactctcaacttcgcagctctctgttttgcat
gcattgatttccgtcttgatactttacgaggataattctcttgaagaaactgcagctgtt
gaaaggaaaatcccttctcgagtcactctttcaagcattgatggagtatctcaaaaattc
tacaccacagttgattcacttgcctctctctgggatgcacccaagattgtgtttgatatt
cttacagcacaggcagacttgctatcccgcctcttgaaatccgcaaagaaaaatctgtca
ttatctatatgtgcacttgtcctgagaaatgttgggcctggcctcaaaatccttggtagt
ttgaggcattcaaatgctatattgaagaagacgataaacctcctgcttgaggtgctgctc
ctggttgttggttttggttcagaaaactcaaactcaagtgggatgggacatatggtgcca
gcaaaagattttacagaaatatctgatgctacaattggattattaccccttctctgcaac
ttcatggggaatcccgagtacatggctctctgcctgaccgcagtagacctgattctcaga
aattttttgacgccggagacatggttccctattatacagaatcaactccgactgcagcat
gttattctacaactgcaggacaagaaatcaacggcatctgtttcagcaatactgaaattt
ttcttaactatcgctcaagttcacggcggtgctcagatgcttctaaattctggatttttc
tcgactttaagagctttgtttgtggagtatccggatggaatgtctactttggtatctgac
aatgaaaagggctcgctgctagaaaagacagaaaaacctcagcatatctggggaatcggt
ttggctgtggttactgccatggttcattctctaggatctggttctgcaggggctgatatt
gtggagagtgtcatatcttactttttcttagagaaaggttacatgatctcgtactatctc
gccgcaccagatttcccttctgatgatcgtgacaaagtgagaccacgaagtcaacggacg
tggacttcccttgcttatctgagagaaaccgagcatactctccttctgatgtgtgcatta
gctagccattggagattatgggttaaaattatgaaggggatggattctccattaagagaa
atgactatacatctcctggcctttatcagcaaaggtgctcaacgccttagagagtctcag
agccaaacatctcatctgttatgccctccggtagtgaaagaagagtttgattcctgcaaa
agacggtcattcatcaacagcaaacatggatggtttgccctagcgcctatagtttgtgtt
gggaaacccaagatcactgctgtatcaatttcgactgctctagttatcaggggacataca
gcagaacatcctgggtctgttactcaatcgcagttttcagactcggtggcaatacagata
tatagagtggcttctgtcttgttgaaatttctgtgtttacaagcagagggtgctgttgaa
cgggcagaagaagtgggatatgtggatcttgctcatttccctgagcttccagagccagag
attttgcacggtctacaggaccaagccaccgcaatagttgctgagctttgtgataattac
agatccaaagaggttccagatgaagttaagaagttgtgccttttgctgatccaaacgaca
gagatgtcgttatacttggaactctgtgtagttcaggtttgcaggatccatccagttttt
ggccgtgtggatagcttctccaaagacttgaaaaagctagtgaaagctgctgaagtgcat
gcgtacttggaactgtccatggattcactgaagaaaatagctgtatttctgtatcccgga
tcgctatag
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