Camelina sativa (false flax): 104716410
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Entry
104716410 CDS
T05044
Name
(RefSeq) RNA-binding protein Musashi homolog 2
KO
K14411
RNA-binding protein Musashi
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104716410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104716410
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104716410
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GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
104716410
NCBI-ProteinID:
XP_010432086
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Position
10:1472805..1475746
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AA seq
380 aa
AA seq
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MERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNA
LKGEHFLGNRILEVKVATPKEEMRQPAKKVTRIFVARIPSSVSESDFRSHFERYGEITDL
YMPKDHNSKQHRGIGFITFASADSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPQPVA
RMSRPPVAVAGGFGAPGGYGAYDAYISAATRYAALGAPTLYDNPASFYGRGEPTTRGIGN
KIFVGRLPQEASVEDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARR
SHEICGQEVAIDSATPLDEAGPSAGGSSMLSSSRPEYLGGYGGGPMRTFGRMYGGMSLDD
WGYGMPNARPSRSDWRYRPY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggaacggaagcttgtggttttgggtatcccatgggatattgattccgatgggcttaag
gattacatgtcaaaatttggagacttggaggattgtattgtcatgaaggatcgatcaact
ggaagatctcgtgggtttggatatgtcacttttgcttcagctgaagatgctaagaacgct
ttgaaaggtgaacactttttagggaacaggatcttggaagtaaaagtggctacaccaaag
gaagagatgagacagcctgcaaagaaggtgacgaggattttcgttgctcgaatcccttca
tcagtctcggaatcagatttccgaagccattttgagaggtatggggaaataacagactta
tacatgcctaaggatcacaactcaaagcaacaccgaggaattggttttatcacattcgct
agtgctgattcagtggaggatctgatggaagacactcatgatttgggaggtacaacggtg
gctgttgatcgggcaacaccaaaggaagatgaccatccgcctaggccacaaccagtggct
agaatgtcgcgtccacctgtggctgttgcaggtggattcggagctccaggtggttatgga
gcttatgatgcttatatttctgcagctacaagatacgcagcgcttggtgctcctactttg
tatgataatccggcctcgttttacggaagaggggaaccaaccacaaggggaataggaaac
aagatttttgttggacgacttcctcaagaagcatctgttgaagatctacgcgattatttt
ggtagatttggccatattcaagatgcttatattccaaaggacccaaagagaagtggacat
agaggtttcggatttgttacttttgctgaaaatggtgttgcagatcgtgtagcccgaaga
tctcatgaaatttgtggacaagaggtagccatagattcagcaacaccacttgatgaagct
ggacctagtgccggtggaagttccatgctaagttcttctcgtcctgaatatttgggtggt
tatggaggaggtccaatgcgtacttttggtcgaatgtatggaggcatgagtttggacgat
tggggatatggaatgccgaacgcacgaccatcaagatcagactggaggtaccggccatac
taa
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