Camelina sativa (false flax): 104716577
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Entry
104716577 CDS
T05044
Name
(RefSeq) plant-specific TFIIB-related protein PTF2-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104716577
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
104716577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
104716577
NCBI-ProteinID:
XP_010432266
LinkDB
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Position
10:complement(2270427..2272559)
Genome browser
AA seq
589 aa
AA seq
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MRCKRCNGSNLEREEGTGNSYCGGCGTLYEYDNYEAQLGGINGPQGTYIRVGTIGVGSVL
AYKDKKIYEANKLIEVITERLNLGNNAETVKSMISKITDGEFGQGEWFPILIGACCYAVV
RKEGKGVLPMEEIANEVGCELHQLGSVVKRVVDHLELELPEFDLVGLFMNTANNSSRLSD
VDREKKERITKQGAFLMNCALKWFLSTGRKPMPLVVAVLNLVVQVNGVKVKIDDFAKDAR
VSLNTCKIRYRELLQRLVKVAEEVRLPWAKDVTVKNVVKHSGTLIGLMEAKSMRKRKHGT
GDDLVRTDEFCLEDIVKDCLSKKPMYRDDDADDDDDHQGAMSRYFDVGGEHQLSICNNDG
DISVKQLPTMSRCSSAGGENQLSLCHNNDDISVKQLPTMSRCSSLGGESELSVCNNDDNM
LVKQLSTMYKEYVDGVWGGILGKISQGNNNSMLQKKSFFQMVSCEDWWKGRSKLSQRLLL
KEVLEKDIGLDVFPPSYIKGCVAVERRREKIEKAKLRIHAIQHPSDIVSEGALSLELEHS
KKRRKKGTEIDWEDLIIQTLVLHNVKDEEIEKGHYKSLLELHVFNCGEV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcgatgcaagagatgcaatggaagcaaccttgaacgcgaagaaggcacagggaattcg
tattgcggtggatgtgggacattatatgagtacgataattatgaggctcaacttggtggt
attaacggacctcaaggtacatatatacgagtaggcaccattggtgtaggctctgttctt
gcttataaggataagaagatctatgaagccaacaaattgattgaggtaatcacagagaga
ttgaatcttgggaacaatgctgaaacggttaagagtatgattagtaagatcactgatggt
gaatttggacaaggtgagtggtttccgattttgattggtgcgtgttgttacgctgtggtg
aggaaagaagggaaaggtgttttgcctatggaggagattgctaatgaagttggttgtgag
ttgcatcagttagggagtgtggttaagcgtgttgtggatcatttggagttggagttgcct
gagtttgatcttgtgggtttgtttatgaacacggctaataactcgtcgaggttgagtgat
gttgatagggaaaagaaggagaggataacaaagcaaggagcttttctgatgaattgtgca
ctcaagtggtttttgtctactgggaggaaaccaatgcctttagttgtggctgttttgaac
cttgttgttcaggttaatggtgttaaggtaaagattgatgattttgctaaagatgctcgg
gtttcgttgaatacctgtaaaattcggtatagagagttattgcagaggcttgtcaaggtt
gctgaagaagtgcgtttaccttgggctaaagatgttactgtgaagaatgttgtgaaacat
tcagggactttgattggtttaatggaagccaagtctatgagaaagagaaaacacgggaca
ggggatgatttagttagaactgatgagttttgtttagaagatatagtgaaggactgccta
agcaaaaaacccatgtaccgtgatgatgatgctgatgatgatgatgatcaccaaggtgct
atgtctcggtattttgatgtaggaggtgaacatcaactaagtatatgtaataacgatggt
gatatatcagtgaaacagttgcctactatgtctcggtgttctagtgcaggaggtgaaaat
cagctaagtttatgtcataacaatgatgatatatcggtgaaacagttgcctactatgtct
cggtgttctagtttaggaggtgaaagtgagctaagtgtatgtaacaatgatgataatatg
ttggtgaaacaattgtctacgatgtataaggaatatgtggatggagtttggggtgggatt
cttgggaaaataagtcagggaaacaataatagtatgttgcaaaagaaatcgttttttcag
atggtttcttgtgaagattggtggaaagggagatctaaactgagtcaaaggcttctgctt
aaggaagtgttggagaaagatatagggcttgatgtttttcctccttcttacataaagggt
tgtgttgcagtcgaaagacgaagagaaaagattgagaaggctaagttacggattcatgcg
atacagcatccttctgacatagttagtgaaggtgcattgtctttggagcttgaacatagc
aagaagagaaggaagaaaggaactgaaattgattgggaggatttgattatccagactctg
gtcttacacaatgtgaaggatgaagaaattgaaaagggtcattacaaaagtttgctagaa
ttgcatgttttcaactgtggagaggtttga
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