Camelina sativa (false flax): 104716579
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Entry
104716579 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MLH3-like isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
csat
Camelina sativa (false flax)
Pathway
csat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104716579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104716579
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104716579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104716579
NCBI-ProteinID:
XP_010432268
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Position
10:complement(2274577..2280959)
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AA seq
1181 aa
AA seq
DB search
MKTIKPLPEGVRHSMRSGIIMFDMSRVVEELVFNCLDAGATKVSIFVGVVSCSVKAVDDG
SGVSRDDLVLLGERYATSKFHDLETASEVFGFRGEALASISDISLLEIRTKAIGRPNGYR
KVMKGSKCLHLGIDDDRKVPGTTVTVRDLFYNQPVRRKYMQSSPKKVLESIKKCVFRIAL
VHSNVSFSVLDIESDEELFQTNPSSPAFSLLMRDAGTEASNSLCKVNVTNGMLNVSGYVS
GPGDSFKALQYIYINSRFISKGPIHKLLNNLAASFECTDDWKPTDGLQTGRRNRIQSNLG
YILCITCPRHLYEFSFEPSKTHVEFKNWEPILAFIGSIILANWKKDTSLEVFDGGADLLA
KGDTQDLRLQEDWPEALEPTKKKLKRSNDQARCSFLSSPAAEVKRNGDYMSEGKGEWSVQ
CEFDMNIENLKEQDTVAKFDCQTDSLPQSCNTDFPQVTDLLETSFVAGVTCSKQSLKRCQ
SSTTRNIDIDLRKDSDELNFQFGGYKDELNVSNFTGMHLLRGCSSRGSLTLKEPIRTHDE
RSGSVMPLILNSDQSNSLIGVLETREGGSQSDIFSDTLEFHGITKTLDCSLGSSWQDTDW
FTPQRSSFSRSVGEDFNISPIDTAEFFSYEDKNFRKKYLSSVNVRNSGAESFCLSSELSP
MFPTPPSATKWKSDYEKGCQILEGSLRLERMPDPEYLFTAANTIKFDHEVIPQMDCRETN
TDSFTDIQNCSQSDEKVCKSLWGHADNVGIEQFSIRKDKFSYRDFRQNNDDEQRSRRSRS
APPFYQDKKKFISLNCRSDTKSKNSDPSEPDDLECLTQPYNTSHMHPKPIIIDDVSYGHI
QETEKRLISASDLKASADCRTVHSETQKEDGDKDFRSKDYVVRDKSTTKWGHNCSVSQVT
QIDRVAKESNELHDQDSVLDICAGLLHLRSDELLVPESINRHSLQDAKVLQQVDKKYIPI
VACGTVAIVDQHAADERIRLEELHKKVLAGEARTVTYLSADEELVLPEMGYQLLQSYSEQ
IRNWGWICNINVEGSTSFKKNMSIIQRKPTPITLNAVPCILGVNLSDVDLLEFLQQLADT
DGSSTIPPSVLRILNSKACRGAIMFGDSLLPSECSLIMEVLKQTSLCFQCAHGRPTTVPL
VNLKALHRQIAKLGSRQLWHGFQRREITLDRAKSRLDKAKS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgatcaagcctttgcccgaaggtgttcgtcactccatgcgttctggaattatc
atgttcgacatgtcgagggtcgtggaggaactcgtcttcaactgtctcgatgctggtgcg
accaaggtttctatcttcgttggtgttgtttcgtgctctgtcaaggctgtggatgatgga
tcaggcgtttccagagatgatttggttttgttgggagaaagatatgctacttcaaagttt
cacgatttggagacagccagtgaagtttttggatttcgtggagaggcgttagcttcaata
tcagatatctcgttactggaaatcaggacaaaagctattgggaggcctaatggttatcga
aaggttatgaagggatccaagtgtctacatcttggaattgatgatgatagaaaagtccct
ggcacgactgtaacggtccgagatctgttttacaatcagccagtgagacgaaaatatatg
caatccagccccaagaaagttttggaatctatcaaaaagtgtgtgttccggattgccctt
gtgcactccaatgtttcctttagtgttcttgatatcgaaagtgatgaagagcttttccaa
accaatccttcttctccagcattttcattattgatgagagatgcagggacagaggcttca
aactcgctttgtaaagtaaacgttacaaatggcatgctgaatgtctctggatatgtatct
ggtcctggagatagtttcaaggccttgcagtatatatatatcaattcaagattcataagc
aaaggtcccatacataagctgctgaacaacttggctgctagttttgagtgtacggatgac
tggaagcctacagatgggttacaaacaggaagacgtaacagaattcaatccaatcttggt
tacattttgtgcataacatgtccacgtcatctttatgaattctcgtttgaaccatcaaag
acgcacgttgagttcaagaattgggaacctatactggccttcataggaagtatcattcta
gccaactggaagaaagatacaagtcttgaagtttttgatgggggtgctgatctactagca
aaaggtgatacacaagaccttagacttcaagaagattggccagaagctttggaacctaca
aaaaaaaagctcaagagaagcaatgaccaggcacgttgtagttttctgtcgtccccagcg
gctgaagtgaaaagaaatggtgattatatgtctgagggaaagggtgaatggtctgtacaa
tgtgaatttgacatgaatattgagaatctcaaagagcaagacactgtggctaaatttgac
tgtcagactgattctcttccgcagtcatgtaacacagactttccacaagttactgacctc
ctggaaacaagcttcgttgctggtgttacatgcagtaaacagtctctaaaaagatgtcag
agtagcacaactcgcaatatcgacattgatcttaggaaagattcagacgaattaaatttt
cagtttggaggatacaaagatgaattgaatgttagcaatttcactggaatgcatctcttg
cgtggttgctcctcaagagggagcctaacccttaaggagcccatacgaactcatgatgaa
cggtctggatctgtcatgcctctgatacttaatagcgaccaaagtaattcgctgattggt
gtcctagagaccagagagggtggttctcaaagtgatatattttctgatactcttgaattt
catggaattaccaagacccttgattgttccctagggagttcgtggcaggatactgattgg
tttactcctcaacgttcctcatttagtagaagtgttggagaagattttaacatttccccc
atcgatactgcagaatttttttcttacgaagacaaaaatttcaggaaaaagtacctttcc
tctgtcaatgtgaggaactctggtgctgagagtttctgtttgagttctgagttgtctcca
atgttccctacacctccttctgcgaccaagtggaagtcagattatgagaaaggttgtcaa
attcttgaagggagtttgagactggaaaggatgcctgaccctgaatatttgttcactgca
gctaataccatcaaatttgatcatgaggtcataccgcagatggattgtcgagaaaccaac
acagattctttcacagatattcagaattgcagtcagtcagatgaaaaagtttgcaagtca
ttgtgggggcatgcagataatgtgggtattgaacaatttagtatcagaaaggacaagttc
agttatagggattttagacagaataatgatgatgaacagaggtcaagaagaagccgctct
gctcctccattttatcaggataaaaagaaatttatcagcttaaattgtagatcagacaca
aaatcaaaaaattctgatccatcagaacctgatgatttggagtgtttgacacaaccttat
aatacatctcatatgcatccgaagccgatcatcattgatgatgtgtcgtatggtcacata
caagaaacagaaaaaagattgatttctgcctcagacttgaaagcatctgctgattgcagg
actgtgcactcagagacccaaaaggaggatggagacaaagacttccgctcgaaggactat
gtagttcgggataaatctacaacgaaatggggccataactgttcagtctctcaggttaca
caaattgatagggttgccaaggaatcaaatgagcttcatgatcaagatagtgtacttgat
atatgtgcaggacttttacacctacgatccgatgaattattggttcctgaatctataaac
aggcactcgcttcaagatgccaaggttctacaacaggttgacaaaaaatatatcccaatt
gttgcttgtggaacagttgccatcgttgatcagcatgctgccgatgaaagaattcgtttg
gaagagctgcataaaaaggtcttggctggggaagcaaggacagtcacctacttgagtgca
gacgaagagttggtactgccagaaatgggctatcagttactccagagttattcagagcag
atacgaaactggggttggatctgcaacatcaatgtagaagggtcaacgtccttcaagaag
aacatgagcatcatccaacggaaaccaaccccaatcacacttaatgcggtcccatgcatt
ctgggtgtaaatctatcagatgttgatctgttggagtttcttcagcagcttgctgatact
gacggatcatcaacaattcctccatctgttcttcgaatcctcaactccaaagcctgtaga
ggtgcaattatgttcggagattctctgttaccctcagaatgctctttaatcatggaagta
ctgaagcaaacctcgctttgtttccagtgtgctcatggacgaccaacgacagttccctta
gtcaatctcaaggcattgcacagacaaatagcaaagctcggttccagacaactgtggcac
gggttccaacgcagagaaattacgcttgatcgtgctaagtcacgcttagacaaagctaaa
agctaa
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