Camelina sativa (false flax): 104716618
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Entry
104716618 CDS
T05044
Name
(RefSeq) DDB1- and CUL4-associated factor 8-like isoform X2
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104716618
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104716618
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
EIF3I
Beta-prop_EIPR1
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
104716618
NCBI-ProteinID:
XP_010432320
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Position
10:2468483..2471222
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AA seq
526 aa
AA seq
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MSESAKRVRSKINGVHHPVVDFWRREVGGISSRNFSNRFSASENLVLRLEIYKKLEKHKG
CVNTVSFNAEGDVLISGSDDWRVILWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDRTIV
TCAADGMVRRANILEGGKVKTSFLGLHQGRAHKLCIEPGNPHVFYTCGEDGLVQRFDLRT
EAPTELLTCQSVDPKRRNMEAIQLNTIAIDPRNSNLFVVGGMNEYARLYDIRRIQRGGLN
GSTHPADHFCPPHLVGNEDVGITGLAFSEQSELLVSYNDEFIYLFAPDMGLGSNPIPASS
KSSVSKSESASSPKDENEQSVPMVYKGHKNSETVKGVTFFGPRSEYVVSGSDCGRIFTWR
KKTGELIRVMEGDRDVVNCIEPHPHIPVLASSGIESDIKVWTSKAAERAILPENIELPKQ
TRLGDGCTVYLHGGNYWHNSSRCKAEEAGVVQREKENHPVEEHVLILSAPSIMRAAMRMQ
LMMAMVIAMRTSSLKNYFGNEFVNICFSPFRNQTNALFFFFWVLHC
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagagtgcgaagagggtccgatcaaaaattaacggagtacatcaccctgttgtt
gatttctggcgacgagaggtcggtggtatctcttcccgtaatttctccaatcgcttctcc
gcctctgagaatttggttttgcgtcttgagatatacaagaagctagagaagcacaaaggt
tgtgtgaacaccgttagcttcaatgctgaaggagatgttctgatttcgggttctgatgat
tggcgtgtcattctttgggattggcaacttgggaacgttaagctttccttccattcagga
cacgctaataacgtatttcaagcaaagtttatgcctttctctgatgatcgaaccattgtc
acctgtgctgctgatggaatggttcggcgtgctaacattcttgagggtgggaaagtgaag
acgtctttcttaggtttgcatcaaggaagagctcataagctatgtattgagccaggaaac
cctcatgtattctacacatgcggtgaagatggattagtacaacgttttgatctgaggact
gaagcccctacagaacttctcacttgccagtcagttgatcctaagaggaggaacatggaa
gccatccagctaaacacaattgcgattgacccgagaaattctaacctctttgttgttggg
ggaatgaacgagtacgctcgtctttatgatatccgtagaattcagcgtggcggtttaaac
ggttcaacccatcctgctgatcacttttgccctccacatcttgttggcaacgaagatgtt
ggaataacaggtttggctttctcagagcaaagcgagcttcttgtttcatacaatgatgag
ttcatatatcttttcgcacccgatatgggattagggtctaaccctatcccagcctcctcc
aagagtagtgtatcaaaatcagaatcagcttcttccccaaaagacgagaacgaacagtca
gttcctatggtttataaggggcacaagaactctgagacggttaagggtgtgacttttttt
ggacctcggtctgaatatgtggttagtgggtcagactgtgggcggatatttacttggagg
aaaaaaactggggagctaatccgtgttatggaaggagatagggatgtagttaactgtatt
gagcctcatcctcatattcctgttcttgccagtagtggaattgagagtgacatcaaggtg
tggacgtcaaaggcagctgaaagagctatattacctgaaaacatcgaactgcccaagcaa
acacgcctaggggatggatgtaccgtgtatctacacggcgggaactattggcacaactct
tcgcgatgcaaagccgaagaagcaggagtagtccagagagagaaggagaaccatcccgtg
gaagagcacgtcttaatcttatccgcaccttcaattatgagagcagcgatgagaatgcaa
ctgatgatggcgatggtaatagccatgaggacttcttctcttaaaaactactttggaaat
gaatttgtaaatatatgtttcagtccctttagaaaccaaacaaatgcactcttttttttt
ttttgggttcttcattgttaa
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