Camelina sativa (false flax): 104716632
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Entry
104716632 CDS
T05044
Name
(RefSeq) WD-40 repeat-containing protein MSI3
KO
K10752
histone-binding protein RBBP4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104716632
03083 Polycomb repressive complex
104716632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104716632
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104716632
Histone modification proteins
HAT complexes
HATB complex
104716632
HDAC complexes
Sin3A-HDAC complex
104716632
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104716632
PRC2.2
104716632
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104716632
Heterochromatin formation proteins
Other heterochromatin formation proteins
104716632
Chromatin remodeling factors
NuRD complex
104716632
NuRF complex
104716632
NuRF complex (fruit fly)
104716632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_SCAP
WD40_RFWD3
ANAPC4_WD40
MIOS_WD40
Beta-prop_WDR75_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
104716632
NCBI-ProteinID:
XP_010432345
LinkDB
All DBs
Position
10:2529046..2531454
Genome browser
AA seq
422 aa
AA seq
DB search
MAAEEGKEEPGLDQVEEEFSVWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYAKDPS
FSVHKLILGTHTSGSAQDFLMVADVVIPTPDAEPGLGGRDQDPIVPKVEIKQKIRVDGEV
NRAQCMPQKPTLVGTKTSGSEVFLFDYARLSAKPQTSECDPDLRLMGHEDEGYGLAWSSF
KEGYLLSGSQDRKICLWDVSATANDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDD
CQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHV
LSRHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH
GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDHDEEGNQNAQHSNEN
QK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaagagggtaaagaagaaccgggattggatcaggtagaagaagagttctct
gtttggaaaaggaacacaccatttctctacgatcttatgatctctcacccgctcgaatgg
ccatctctaactcttcattgggtcccttctactccgattccgtatgcaaaagatccttcc
ttttccgtccataagcttatcctcggcactcatacctccggtagtgcccaggattttcta
atggttgctgacgtcgttatcccgacacctgacgctgaaccaggattaggcggacgagat
caagatcctatcgtccctaaggtggagattaagcagaagatacgtgttgatggagaagtg
aacagagctcagtgtatgccacaaaagccaactcttgtgggtactaaaacgagtggctct
gaggtgtttctctttgattacgccagactctctgcaaagccccaaactagcgagtgtgat
cctgatctcaggctaatgggacatgaagatgaaggttatggattggcttggagctccttc
aaggaaggttatcttttgagtggctcacaagatcggaaaatctgcctctgggatgtttca
gctactgccaatgataaggttttgaacccaatgcatgtgtatgagggacatcaaagcatt
atcgaagatgtagcatggcacatgaagaatgaaaacatatttggttctgcgggtgatgat
tgtcaattggtgatatgggacttacggacaaaccaaatgcaacaccaagtcaaagttcac
gagagagagataaattatctttctttcaatccctttaatgaatgggtattagccacagct
tcctcagattcgactgttgccttgtttgacctccgtaagctgactgcaccattacatgtt
ctgagcagacacgagggagaagttttccaagtggagtgggatcccaaccatgaaacagtg
cttgcatcttctggcgaggaccgaagactcatggtctgggatatcaacagggtcggggat
gagcagcttgaaatagagttggatgcagaagatggtccacctgagctgctcttctctcat
ggaggccacaaggccaagatatcagactttgcctggaacaaagacgagccttgggtcatc
tcaagtgtagctgaagacaacagtcttcaagtctggcaaatggcggaaagcatctaccgc
gaagatgatgaggatcatgatgaagaaggcaaccaaaatgctcaacattccaatgaaaac
cagaaatga
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