Camelina sativa (false flax): 104716666
Help
Entry
104716666 CDS
T05044
Name
(RefSeq) inactive squalene synthase 2-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00100
Steroid biosynthesis
csat00909
Sesquiterpenoid and triterpenoid biosynthesis
csat01100
Metabolic pathways
csat01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104716666
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
104716666
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csat01006
]
104716666
Enzymes [BR:
csat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104716666
Prenyltransferases [BR:
csat01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104716666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
104716666
NCBI-ProteinID:
XP_010432387
LinkDB
All DBs
Position
10:complement(2699163..2702001)
Genome browser
AA seq
413 aa
AA seq
DB search
MGSLSTILRHPDELYPLLKLKIAINKAQKQIPLEPNLAFCYSMLHKVSKSFSLVIQQLGT
ELRNAVCVFYLILRALDTVEDDTSVAVEIKLPILIAFHRHIYDCDWHFSCGTKEYKVLMD
QFHHVSAAFLELEKGYQEAIEDITKRMGAGMATFICKEVETVDGYDEYCHYAAGLVGLGL
SKIFITSELEMLTPDWEHISNSTGLFLQKTNIIKDYLEDINEIPKSRMFWPREIWGKYVD
KLEVLQYEENSTKAVKCLNEMVTNALIHVEDCLKSLASLRDPAIFQSCAIPQIVAIGTLA
LCYNNIQVFRGVVRLRRGLIAKIIDRTKNMDDVYGLFYDFSCMLQSKVDKSDPDAMKTLN
RLETIKKVSRDNGVLHKRKTYVKDDAQSKDVFIVMFVLLLAIVVMYLKANQCK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcttgagtacgattttgagacacccggatgagttatatccgcttttgaagttg
aaaattgctataaacaaagctcagaagcagatcccacttgagccaaacttagctttctgt
tattcaatgctccacaaagtttctaaaagcttttctcttgttattcaacaacttggcact
gagcttcgtaacgcagtgtgtgtgttctacttgattctccgagctcttgataccgtcgag
gatgacaccagcgtagcagtggagatcaaacttccaattctgatagctttccaccgtcac
atatacgattgtgactggcatttttcatgtggtacgaaagagtacaaggtgttaatggac
cagtttcaccatgtttctgcagcttttctggaacttgaaaaagggtatcaagaggctatt
gaagatataactaaaagaatgggtgcaggaatggccacgttcatttgtaaagaggtagaa
acagttgatggctatgatgaatactgccattatgctgctggacttgtgggtttaggtttg
tcaaaaatcttcatcacttcagaattagaaatgctgactccagactgggagcacatttca
aattctacaggtttatttctccagaaaacaaacattatcaaagattatcttgaagacatt
aatgagataccaaaatcgcgcatgttttggcctcgtgagatctggggaaaatatgttgac
aagcttgaggtgcttcaatatgaggagaattcaacaaaagcagtgaagtgtttgaatgaa
atggtcactaatgcattgattcacgttgaagattgtttgaaatccttggcttcattgcgt
gatcctgctatatttcagtcttgtgccatccctcagatcgtggcgattggaacactagca
ttatgctataacaatatacaagtctttagaggtgtcgtgagattgaggcgagggctaata
gctaaaatcattgatcgaacaaagaatatggatgatgtctatggtttgttctatgatttt
tcttgcatgctacaatcaaaggttgacaagagcgatcctgatgccatgaaaacattaaac
cgactcgaaacaattaagaaagtttccagagataatggagtccttcacaaaagaaaaact
tatgttaaagatgatgcacaatcgaaggatgtctttattgtaatgtttgtgcttctattg
gccatagtcgttatgtatctcaaagcaaatcaatgtaagtag
DBGET
integrated database retrieval system
