Camelina sativa (false flax): 104716832
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Entry
104716832 CDS
T05044
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104716832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104716832
03036 Chromosome and associated proteins [BR:
csat03036
]
104716832
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
104716832
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
104716832
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
WDR55
Beta-prop_EML
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR75_1st
RMC1_N
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_RIG_1st
Pep3_Vps18
CFAP43_N
WDR54
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
104716832
NCBI-ProteinID:
XP_010432586
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All DBs
Position
10:3350288..3352798
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AA seq
456 aa
AA seq
DB search
MDAGMSTPSYLKAQVRCPLQEHFLPRKSSKENLDRFIPNRSAMDFDYAHYALMEARKGKD
QSETVSSPSKEAYRKQLAETMNLNHTRILAFRNKPQAPVDLRPTDHSASLHQQPKSVKPR
RYIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEE
KGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLNGCHQSRVGSLAWNNHILTTG
GMDGQIVNNDVRIRSHIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSN
STTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV
CSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAA
GDETLRFWNVFGVPETTKKAAPKTAPEPFSHVNRIR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtatgagcactccttcttacttaaaggcacaggttcgttgccctcttcaa
gaacacttccttcccaggaaaagttccaaggaaaacctggacaggttcatacccaacaga
tcagctatggatttcgattatgcacactacgcccttatggaagcgagaaaaggtaaggat
caatcagaaacggtaagttcaccatccaaggaggcctacaggaagcagttggctgagacc
atgaacctcaaccacacccggatccttgccttcagaaacaaaccccaagctcctgtagat
cttcgtcccacggatcactctgcttctcttcaccagcagcctaaatctgtaaagcctcgc
agatacattcctcagacttctgagagaaccttggatgcacctgacattgtggatgatttc
tacctcaacttgcttgactggggaagtgcaaatgtcttagccatagccttggaccacact
gtctacttatgggatgcttccactggttctacttctgagcttgtcaccattgatgaagag
aaaggacctgtcacaagtatcaattgggcacctgacggtcgtcatgttgcagttggactc
aacaactctgaagtccagctctgggattctgcttccaaccgtcaactgagaacattgaat
ggttgccaccaatcaagagtaggatcattggcgtggaacaatcacatcctgactactgga
ggaatggacgggcagattgtcaacaacgatgtacggatcagatcacatattgtggaaact
taccgaggtcacactcaagaggtttgtggtctgaagtggtcaggatctggacagcaacta
gcgagtggtggcaacgacaatgtggtacacatttgggatcgttctgtcgcctcctcaaac
tcaactacgcaatggctgcacaggctcgaagaacatacatctgccgtgaaagctcttgcg
tggtgccctttccaagcgaatttgcttgcaactggtggtggcggtggagacaggaccatc
aagttctggaatactcacaccggggcttgcctgaattcagtagacactggttcccaagtt
tgttcgttgttatggagcaagaatgaaagagagttgcttagctcacatggatttactcag
aatcagcttacactttggaagtacccatccatggtgaaaatggctgagctcaccggtcat
acatcaagagtcttatatatggcccagagtccggatggttgtaccgtggcttcagcagca
ggtgacgaaactctgagattttggaatgtttttggagtaccagagaccaccaaaaaagct
gctccaaaaactgctccggagccattttctcatgtgaatcgtattcgttga
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