Camelina sativa (false flax): 104716883
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Entry
104716883 CDS
T05044
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104716883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104716883
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
104716883
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
104716883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
104716883
NCBI-ProteinID:
XP_010432649
UniProt:
A0ABM0TWX8
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Position
10:complement(3609765..3615145)
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AA seq
789 aa
AA seq
DB search
MMVGTQSLGGSLPPLNSPKSYGITKPLSLAGPSSTDIKRNVELEKYLVDEGLYESEEDTM
RREEVLARIDQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCV
GPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVV
PQDLDISSSTVLCDVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYS
NVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFP
VWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNSILQEIELNKQHW
SSLFEQYMFFEAYKNYLQVDIVAAEAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQ
PNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYVFWKPGMDVF
VSHVRRRQLPPFVFPNGYRRPRQSRHQNQQGGKSGEDGTVSHTGSVVERNAKRKNDNEMM
DTRPEKPEKRASLSPQSLDIVSPESSAITTGCTPPICNLRRPPGEEIEAENLNTESTELT
NFARNECISGSGQVLELHSAALVQECSDPAEPLGKCVTPDSSDMVALGSVQEENLDSELK
SVSISGTNSQLLPSLLDRKRGVADEVERESKIFSGTSTTGQIADSVQQSRSCGQNHDYEG
FGFPAANSDPFVGKDSLYPQSGMSEDLQVLHCKATPSNSLVSGMEKPEDRARSESLQKSQ
IRLSLKSTV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgggtactcaaagtttaggtggttcgttgccgcctcttaattctcctaaaagc
tatggaattacgaaaccgctctcgcttgctgggccttcctctacggatatcaagcgtaat
gtcgagctggagaagtacttggttgacgagggactctatgagagcgaggaggataccatg
cgtagagaggaagttctggcgcgcattgatcagattgtaaagcactgggtgaaacagtta
acgcagcaaagaggatatacagaccagatggtagaggatgcaaatgctgttattttcacc
tttggatcctaccggcttggcgtacatgggcccggggctgacattgatactctgtgcgtt
gggccatcttatgttaatcgggaggaggatttcttcatcatcttgcatgacatattggct
gagatggaagaagtgactgagcttcatcctgttcctgacgcccacgttccagtcatgaaa
tttaagtttcaaggaataccgattgatctactctatgctagcatatcacttttagttgtg
ccacaggatctggatatctccagctcgactgtgctgtgtgatgttgatgagccaaccgtt
cgaagtcttaatggttgtagagttgctgatcagattcttaaactcgttccaaattttgag
cacttccggacaacattaagatgcctgaagtactgggctaaaaagcgtggcgtatattca
aatgtgactggatttcttggcggtgtaaactgggcacttttggttgctcgtgtgtgccag
ctctatccaaatgcaattcctagtatgctagtttctcgttttttcagagtatatactcaa
tggcggtggccgaacccagtcatgctttgtgcaatagaagaggatgagcttggatttcct
gtctgggaccctcgaaaaaatcatcgagaccgctatcaccttatgccaataataactcca
gcttacccatgcatgaattctagttacaatgtctctcagagcactcttcgcgttatgaca
gagcagttccagtttggtaactcaatcttgcaggagatcgaattaaataaacagcattgg
agctctctatttgaacaatatatgtttttcgaggcatataaaaactaccttcaggttgat
atagtggctgcagaggcagaagatttgttggcttggaagggttgggtggaatcgcggttc
agacagctgaccttaaagatagaaagagacactaatgggatgttaatgtgtcatccccaa
ccaaatgagtatgtagacacggctaggcagtttctgcattgtgcctttttcatgggtttg
cagagggcagagggagttggtggtcaagaatgtcaacagtttgatatacgtggtacggtc
gatgagttcagacaagaagtaaacatgtatgtgttctggaaacctgggatggatgtgttc
gtttctcatgttcgtagacgacagcttccaccttttgttttcccaaatggatatcgaagg
cctcggcagtccaggcaccaaaatcaacagggtggaaaatctggtgaagatggcaccgtt
tctcataccggctctgtggtagagaggaatgctaagagaaagaatgataatgaaatgatg
gatacgaggccagagaaacctgagaagcgtgcatcgcttagtccacagagtctagacata
gtctcacctgaaagtagtgctatcactactggttgtactcctcctatttgcaaccttaga
aggccccctggtgaggaaatagaggctgaaaatttgaacactgagagtactgaactaact
aactttgcccgaaatgagtgcatctctggcagcgggcaagttttggaactacatagtgcg
gctctagttcaagaatgctctgatccagctgagcctttgggaaagtgcgtgacacctgac
tctagtgatatggtagcacttggaagcgtacaggaagaaaatttagatagtgagttgaag
tctgtatcaatcagtggtaccaactctcaacttcttccaagtcttcttgataggaagaga
ggtgtagccgatgaagttgagagagaatcaaagatatttagtgggacgagtacaactgga
caaattgctgatagtgttcagcagagcagatcctgcgggcagaaccatgattatgagggt
ttcgggtttcctgctgcgaattcagatccttttgttggaaaggatagtctgtaccctcaa
agtggcatgtcagaagaccttcaggtcctgcactgcaaagcaactccgtcaaactctttg
gtcagcgggatggagaagccagaagacagagctaggtcagaatctctgcagaagtcacag
ataaggttaagcttaaagtccactgtgtga
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