Camelina sativa (false flax): 104716942
Help
Entry
104716942 CDS
T05044
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104716942
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104716942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
104716942
NCBI-ProteinID:
XP_019086667
LinkDB
All DBs
Position
10:complement(3940742..3942568)
Genome browser
AA seq
385 aa
AA seq
DB search
MVKDWGSKKSECWLCFERVTGLVLNGSGVLNSNGKSWWSSVGSSSRPEAVRFLGCQNILY
NGLTQINSPRNHISVVGCTNATLLNLHLISPSSSPNTNGIDISVSHNIQIHSSSIKTGDD
CISILGGSYDINITYVTCGPGHGISIGSLGKGGANDIVQNVNVRHCTFTRTENGARIKTW
PGGRGFVKNILYEDITLINVRSPIIIDQHYCNGVRPCPQPAGASALKVSGVTYRYFKGTS
FPDVTAVKLDCDQRTVCDNIVMEHINITSSSQRRPLASYCRFAHVIRRFVSIGINCGFHV
NPQTPSVAPYVLPQAPYSEPPALTAQPTSPTPYATPSTPTSQPPAPIAISPTQHAEPPAL
HTLSSTPYAEHPPTVHYSLFSPFIY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagactggggaagcaaaaaaagtgagtgttggttatgtttcgaaagggtgaca
ggtctcgttctcaatggatctggtgttctcaattccaatggaaaaagctggtggtcttct
gttggctcatcctcccgaccagaggcagtgagatttcttgggtgccaaaacattttatat
aatggattaactcaaatcaatagtccaaggaatcacatatcagttgttggttgcaccaac
gcaactttattaaatcttcatttgatctcaccctcaagcagtccaaatactaatggcatt
gatatctctgtttcacataatatccaaattcacagttcatcaatcaaaaccggtgatgat
tgcatttcaattctaggtggttcttatgatatcaacataacttatgtgacatgtggtcct
ggtcatggcataagtatcggaagtctagggaaaggaggggcaaatgatatagtacaaaat
gtgaatgtcagacattgcaccttcactcgaactgaaaatggcgcaagaatcaagacttgg
cctggaggacgtgggtttgtcaaaaatattttgtatgaagatattactctgataaatgtc
agatcccccatcatcatcgatcaacattattgtaacggtgttcgtccgtgtccacaacca
gcaggggcatctgctttgaaagtgagtggcgtgacatatagatactttaaagggacaagt
tttcccgatgttactgcagtaaaattagattgtgaccaaagaacagtttgtgataacatc
gtcatggagcacatcaatatcacttcctcatctcagagaaggcctctcgcctcgtactgc
agatttgcgcatgtaattagacgctttgtttccattggcatcaattgtggttttcatgtc
aatccccaaactccatcagttgcaccgtatgttttacctcaggcaccgtattctgaacct
cccgcactcaccgctcaacctacatcacccacaccgtatgctacaccttcgacaccaact
tctcaacctccagcaccaattgctatatccccgacacaacatgctgagcctccagcattg
catactctatcttcaacaccgtatgctgaacatccaccaactgttcattattcactattc
tctccttttatatactaa
DBGET
integrated database retrieval system
