Camelina sativa (false flax): 104717146
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Entry
104717146 CDS
T05044
Name
(RefSeq) autophagy-related protein 18b-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
csat
Camelina sativa (false flax)
Pathway
csat04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
104717146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104717146
03029 Mitochondrial biogenesis [BR:
csat03029
]
104717146
Membrane trafficking [BR:
csat04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
104717146
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104717146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_RSE1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
104717146
NCBI-ProteinID:
XP_010432979
LinkDB
All DBs
Position
10:4834315..4836899
Genome browser
AA seq
366 aa
AA seq
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MANQSSPSPIYCVSFNQDNSGFAISWKNSFKIFDSTTGRLCYERAAGAFVIVEMLYSSDL
LAIVGAGEQASLSPRRLCLFKTTTGSPLRELNFLTSILAVRMNKKRLVVVLLEKTFVYDL
NTLVMLDTIDTVPNPKGLCAFSPCLEACYLAVPASVTKGSVLVYNVMDLQSHSEIDAHRS
PLAAIALSSNGMYIATASEQGTLIRVHLVSEATKSFSFRRGTYPSTIYSLSFGPSTELPD
ILVATSSSGSIHAFSLRLAINQRSKRSTSFLGSVLPDSVSDALDPAHHHVLHNAVSSGIR
SYAVVRKIDKLEGSSSPSQFTSLRATVSVITYNGYFQEYTLSINNKNESSWTLEREFNLL
SITTTR
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcagtcctctccttctcccatctattgtgtttctttcaatcaagataatagt
ggttttgcgataagttggaaaaattctttcaaaatattcgattctactacaggcagactc
tgctatgaacgagctgctggggcttttgttattgttgagatgttgtatagctcagatcta
cttgccattgttggagctggtgaacaggcttctctatccccacggcgtctttgtttgttt
aagaccacaacgggttcacctcttagggaattgaactttttaacttctatactcgctgtc
cgtatgaacaagaaaagacttgttgttgtgctgctagagaaaacattcgtttacgacttg
aatactcttgtcatgcttgatactatcgacaccgtgccaaatccaaaaggtctatgcgca
ttctctccttgtcttgaagcctgctacttagctgttccagctagtgtgacgaaaggatct
gttctggtttacaacgtcatggatttgcagtctcatagtgagatagatgcacatcgttct
ccattggctgcgattgcactctcttcaaatggaatgtacattgctacagcatctgagcaa
ggaactctgatccgagttcatcttgtttcggaagctactaagtcatttagtttcaggaga
ggaacatacccatctactatatattcactgtcttttggaccatcgacagagcttccggat
atattagttgcaacgagttcttcaggctccattcatgccttctctttaaggttggccata
aaccaaagaagcaaaaggtctaccagctttcttggttcggttcttccagacagcgtgagt
gatgcactagatccagctcatcatcatgtgctccacaacgcagtttcttctggaattaga
agttatgcagtggttaggaagatagacaaacttgaaggatcatcatctccatctcagttt
acatctcttagagcaacggtatcggtgattacgtataatgggtatttccaggagtatacg
ctaagtatcaacaacaagaatgaatcttcgtggacactggaacgtgaattcaatctcctc
tctataaccaccaccaggtga
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integrated database retrieval system
