Camelina sativa (false flax): 104717191 Help Entry 104717191         CDS       T05044                                  Name (RefSeq) probable helicase MAGATAMA 3   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism csat  Camelina sativa (false flax) Brite KEGG Orthology (KO) [BR:csat00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:csat03021]     104717191 Enzymes [BR:csat01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      104717191     5.6.2.5  RNA 5'-3' helicase      104717191 Transcription machinery [BR:csat03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      104717191 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_12 AAA_11 AAA_30 AAA_19 UvrD_C_2 AAA_16 Motif Other DBs NCBI-GeneID:  104717191 NCBI-ProteinID:  XP_010433029 LinkDB All DBs Position 10:complement(5130803..5137440) Genome browser AA seq 1332 aa AA seqDB search MASEGKLFFDLNELPTEDDDGNDNVNFNQPQTATPFANPNTSGLLATPSSSQDIVNNRVF SHASTVSDVNNRLFSHASTVSGFQPFVRPISAQRSDVSVEQKMDENSLKESLSSSRPDTS EEAKVAPSIVPNDAGAPEREEGEWTESEVPANEDVHSSSDYSKVREKDNGTVGLDINSNL GLQNKNVNQISESSGKDGASIDSPQEQGLLVRQRETKGVEASHAIKCANTTVKRKMDHQK ETMLGKKRNRQTVFLNLEDVKQAGPIKATTPRRQNFPQPIVTRTVRETRAGPPPAEQGGG VPGHVVYRDQKPSDIPNGGVHPETSEPKLESNGESQSGSVGKTRRTNGEAGPSAEGSVSR QGSWKQPMNSRQLKSGHSSNRQVTLSSQTSADSKFGNKKFTSFKKQANSTQYQDTSVERL IREVTNEKFWQHPEDTDLQSVPERFESMDEYVRVFEPLLFEECRAQLYSTWEELAEANSY MKVRIKFIERRERGWYDVILLSVNECKWAFKEGDVAVLSNPVPESEGEHDEAGRVAGTVR RYIPVDTRDPHGAILHFYVGDTYDSGSKIDDNHILRKLKPKEIWHLSVLGSLATTQREYV ALHAFSQLNPQMQNAILRPSPEQFPNYGEQTPTVPDCFTPSFAGHLHRSFNAPQLAAIHW AAMHTAAGTSSGVKRQDPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQQYYTSLLKKLA PESYKQVSESSSDHIVSGSIDEVLQNMDQNLFRTLPKLCAKPRMLVCAPSNAATDELLSR VLDRGFIDGEMRVYRPDVARVGVDTQTRAAQAVSVERRSEQLLAKSRDEILGHMHNLRLR ETQLSQDIAGLKRELTAAAFANRSQGSVGVDPDVLMVRDQTRDALLQRLSAVVEARDKDL VEMSRLLIVEGKFRAGGNNFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFD MVVIDEAAQASEVGVLPPLALGAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLA GCPTLLLTVQYRMHPQIRDFPSRYFYQGRLTDSESVSAAPDEIYYKDSVLKPYLFFDISH GRESHRGGSVSYENIDEARFCVGVYLHLQRTLKSLGGGKVSVGVITPYKLQLKSLKIEFA NALGQDELKEIYINTVDAFQGQERDVIIMSCVRASNHGVGFVSDIRRMNVALTRAKRALW VMGNASALMKCEDWAALITDAKARNCFMEMESLPKDFPVPKVPSFIPKAPNARSFRSGGP RTRSIDMHPESRSGTPSEDDEKLSTTTFPRNGNIRRENSVDDSDLPGDRYRDAWQHGIQR RQNFGRPLGRRD NT seq 3999 nt NT seq  +upstreamnt  +downstreamnt atggcttcagaaggaaaattgttctttgatcttaatgaacttcctacagaagatgatgat gggaatgataatgttaacttcaatcagccacagacggctaccccatttgcaaaccccaat acctctggcttgctcgcaactccatcgtcctcccaagatattgtaaacaaccgagtgttc tcacatgcatcaacagtttctgatgtaaacaaccgactgttctcacatgcatctacagtt tctggctttcagccttttgtccgccctatctctgctcaacgctcggatgtctcagttgaa caaaagatggatgagaattctcttaaggaatcattgtcatcatccaggccagacacatcg gaggaagcaaaggttgcaccatcaatagttccaaatgatgctggggcacctgagagagaa gaaggggaatggacagagtcggaggttcctgccaatgaggatgtacatagtagttctgat tattctaaagttagagagaaggataatggcacagtaggattagatatcaactcaaacttg ggtcttcaaaacaaaaacgttaatcagatttcagaaagcagtggtaaagatggtgcatct atagatagtccgcaagaacagggtttactggtgaggcagagagaaactaaaggagttgaa gcaagtcatgcaatcaagtgcgcaaataccactgtgaaaagaaagatggatcatcagaaa gagacgatgttgggaaagaagcggaacaggcagaccgtgtttctcaacctagaagatgtt aagcaagctggtccaattaaggccacaacaccaagaagacagaatttcccacaacctatt gtcacgcggacggttagagaaactcgcgcaggtcctccacctgctgaacaaggaggcggg gttccagggcatgttgtataccgggatcagaaaccgagtgatattcctaatggtggagta catccagaaacatctgaaccgaaattagaatctaatggtgaatcacaatctggctcagtt ggtaaaactaggagaacaaatggggaggcaggaccttctgctgaaggttctgtgtcaagg caggggtcatggaagcagccaatgaattcgcggcagctgaagagtggtcattcgtcaaat agacaagtcaccttgtccagtcaaacttctgcagactcaaagtttggaaacaagaaattt acttcgttcaagaagcaagccaatagtacccaataccaagatacctccgtggagcgtctt atacgagaggtgaccaacgaaaagttttggcagcatccagaggatactgatctccaaagt gtccctgagcggtttgaatccatggatgagtatgttagagtgtttgaacctttacttttc gaggagtgccgggcacaactttacagtacatgggaagaattggctgaggcaaattcatac atgaaggtcagaataaagttcatcgaaagaagagagagaggatggtatgatgtgatactt ctctcagtaaatgaatgtaaatgggctttcaaggagggagatgttgctgttctttcaaat cctgtgcctgaatcagaaggagagcatgatgaggctggacgtgtagctggtacagttaga agatatataccggttgatactcgagatcctcatggagcaattctccatttctatgttgga gatacttatgattctggcagcaagattgacgataatcatattttacggaagcttaaacct aaggagatctggcatctgtcagtgcttggttcgcttgcaaccacacaaagggaatatgtt gctttgcatgcgttttctcagcttaacccacagatgcaaaatgcaattctcaggcctagc ccagagcagtttcctaattacggggagcagactcctacagtgcccgattgttttactccg agctttgctggccacttacatagaagctttaatgctcctcagttggctgcaatccattgg gccgcaatgcatactgcagctggtacaagcagtggggtaaagaggcaagatccatggcca tttactcttgttcaaggccctccaggaacaggcaagacacacacagtttggggaatgttg aatgttatccatttggttcagtatcagcagtattacacttcgttgctgaagaaattagct cctgaaagttataaacaagtaagtgagagcagttcagatcatattgtgtcaggatcaatt gatgaagtcctacaaaacatggaccagaatctatttcgtacgctgccaaaattgtgtgct aaaccaagaatgctcgtttgtgctccttcaaatgctgcgaccgatgaacttctctcacgt gtccttgatcgtggttttattgatggggaaatgagagtttatcgccctgatgtggctaga gtaggtgttgatacccaaacgagagctgctcaagctgtttctgtggagcgtagaagtgag cagctattagccaagtcccgtgatgaaattctaggacacatgcacaacctcagattacga gaaacgcagctatctcaagatattgctggacttaaaagggaacttactgctgcagccttc gctaaccgttctcagggatccgttggcgttgaccctgatgttcttatggttagggaccag acaagagatgcattgttacagcgcctttctgctgttgttgaagccagagataaagatctt gttgaaatgtctcgccttctcattgtcgagggaaagtttcgcgctggtggtaataacttt aatcttgaagaagctcgtgcaagtcttgaggcaagtttcgcgaacgaggctgaaattgtt tttacaactgtatcaagcagtggtcgtaaactgttttctcgtcttacgcatggcttcgat atggtggtcatcgatgaggctgcccaagctagtgaggttggagttcttcctccccttgct cttggtgctgcacgatgtgtacttgtgggtgatcctcaacagcttcctgctacagttatt agcaaagccgctggaacccttttatacagtagaagtctctttgaaaggtttcagttagca ggttgtccaactttgttgttaacagttcaatataggatgcatcctcaaatacgtgatttc ccttcaagatatttctaccaaggacgcctcacagacagtgaaagtgtttccgctgctcct gacgagatttattacaaagattctgtccttaagccttaccttttctttgatatcagccat gggcgggaatctcatagaggtggatcagtatcttatgagaacattgatgaagctcgcttt tgtgttggggtgtacttgcatcttcaaagaactctgaagtcattgggcgggggtaaagtc tctgttggggtcataaccccatacaaactgcagttgaaaagcctgaaaatcgagttcgca aatgctttgggccaagatgaactgaaagagatttatatcaatactgtagacgcgtttcag ggtcaagaacgtgatgttataattatgtcatgtgtgcgtgcttccaatcacggtgttggc tttgtctctgatatccggcggatgaatgttgctctcacccgtgccaaaagagctctatgg gtcatgggaaatgcatctgctctaatgaagtgcgaagattgggcagcactgatcactgac gccaaagcaaggaactgttttatggagatggagtctcttcccaaggatttcccggttcca aaggtacctagctttatcccaaaagcacctaatgctagaagtttcagatcaggtggacca agaaccagatccatcgacatgcaccctgaatccaggtcagggacaccatcagaagatgac gagaagctgagcacaacaacatttccaagaaatgggaatattcgaagggagaactcagtt gatgattctgatcttcccggggatagatatagagatgcttggcaacatgggatccaaagg aggcaaaattttggacggcctttagggagaagagactaa

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