Camelina sativa (false flax): 104717227
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Entry
104717227 CDS
T05044
Name
(RefSeq) WD-40 repeat-containing protein MSI5-like
KO
K10752
histone-binding protein RBBP4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104717227
03083 Polycomb repressive complex
104717227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104717227
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104717227
Histone modification proteins
HAT complexes
HATB complex
104717227
HDAC complexes
Sin3A-HDAC complex
104717227
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104717227
PRC2.2
104717227
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104717227
Heterochromatin formation proteins
Other heterochromatin formation proteins
104717227
Chromatin remodeling factors
NuRD complex
104717227
NuRF complex
104717227
NuRF complex (fruit fly)
104717227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_IP5PC_F
ANAPC4_WD40
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
104717227
NCBI-ProteinID:
XP_010433073
LinkDB
All DBs
Position
10:5330733..5334374
Genome browser
AA seq
488 aa
AA seq
DB search
MESEEAAATVQATRPRRRVSRNPVTAIVPKTRVRKPKKNEESSQSPQQQSHKATVEDKFS
QWKALVPILYDSFANHALVWPSLSCRWGPELEQAASKTQRLYLSEQTNGSVPNTLVIANC
EAVNRQLNEAAYSPLVKKYKTIIHPGEVNRIRELPQNNKIVATHTDSPDVLIWDTETQPD
RYAVPGAPNSSPDMLLTGHQDDAEFALAMCSTEPFVLSGGKDKSVVLWNIQDHITKAGTD
SKSPGSSFKRTGEGGNKTGCPSVGPRGVYRGHEDTVEDVAFCPSSAQEFCSVGDDSCLML
WDARTGTNPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVCSPV
YTFEGHKAAVLCVQWSPGKSSVFGSSAEDGLLNLWDYDRVGKKSERAPKSPDGLFFQHAG
HRDKVVEFNWNVLDPWTIVSVSDNCESSGGGGTLQIWRLSDLIYRAEEEVLTELEKFKSH
VFTCTSKP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgaagaagctgctgcgactgttcaagccaccaggccgagaaggcgagtatcc
aggaatccggtgacggccattgtgccgaagacgagagttcgtaaacccaagaaaaatgaa
gagtcttctcagtcacctcaacagcagagtcataaggccactgttgaggataagttctct
cagtggaaggctcttgttcccattctctatgattcgtttgccaaccatgccctcgtctgg
ccctctctctcttgcagatgggggccagagcttgagcaagcagcttcgaagactcaacgt
ctctatctctcggaacaaactaatggcagtgtgcctaatactttggtcatagccaattgc
gaagctgttaataggcagcttaatgaagcggcttactctccattggtgaagaagtacaag
accatcatccaccctggagaggttaacagaatcagggaactcccacaaaataacaagatt
gtagctactcacaccgatagtcctgatgttctcatttgggacactgagactcaaccagac
cggtatgctgtgcctggagctccaaattcttctccggatatgttactaactgggcatcag
gatgatgctgaatttgctcttgcaatgtgctcaaccgaaccctttgttctctctggaggc
aaggacaagtccgttgttttgtggaatatccaagatcatataacaaaggctggtacggat
tccaaatcgcctggatcaagcttcaaacggactggtgaaggtggtaataaaactggttgt
ccttctgttggccctcgaggcgtatatcgtggtcacgaggatacagttgaagatgtggca
ttctgtccatctagtgcacaggaattctgcagtgttggtgatgattcttgcctaatgcta
tgggacgcaagaactggcactaatcccgccatgaaggttgagaaggcacatgatgctgat
cttcattgcgtcgattggaatcctcatgacaacaatttgatcctgacagggtcagcagac
aacactgtccgtgtgtttgaccgccgaaacctgacctcaaatggagtttgttcacctgtc
tacacatttgaaggccacaaagctgctgttctttgcgttcagtggtctcctggtaaatca
tctgtgtttgggagttccgcagaagatggcctcttgaacctttgggattatgatagggtt
ggtaagaagtccgagcgtgcacccaaaagtcctgatgggcttttcttccagcatgctggt
cacagggacaaagtggtcgaattcaactggaacgtattggacccttggactattgtcagt
gtttctgataactgtgagagtagcggtggaggtggaacattgcagatatggcggttgagc
gacttgatttacagagcggaagaggaagtcttaacagagctagaaaagttcaagtcacat
gttttcacatgtacctccaagccttga
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integrated database retrieval system
