Camelina sativa (false flax): 104717363
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Entry
104717363 CDS
T05044
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104717363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104717363
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
104717363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
104717363
NCBI-ProteinID:
XP_010433223
LinkDB
All DBs
Position
2:complement(4189841..4193651)
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AA seq
541 aa
AA seq
DB search
MSYCLQLKPACIGCGSQSDLYGSSCRHMTLCLKCGKTMAENKAKCLDCGTVLTRLIREYN
VRAAAPTDKNYFIGRFVTGLPNFKKSSENKWSLRKDIPQGRQYTDAQREKLKNKPWILED
ETGQFQYQGHLEGSQSATYYLLVMQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKN
RRKTADGYQRWMMKAANNGPALFGEVDNDKEAGGSSGGGGRGRKKSSGGDEEEGNVSDRG
DEDEEEEASRKSRLGLNKKSNDDDEENPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVG
NDPEEREDLLAPEIPAPPEIKQDEDDEENEEEEGGLSKSGKELKKLLGKSNGLNESDEDD
DDDSEEEEETNVSPVTNLKQKEVAKEEPVETAPAKPAPSGPARGTPPAKPSKGKRKLESD
SKKPSSSVQKKVKTENQDPRSSVKEERTNTVSKSNTPTKSVKAEPASAPASSSAATGPVT
EDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFADILRKISKIQKNAGSQNFVVLRE
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtactgtttgcaattgaaaccggcttgtatcggatgtggatcacaatccgatttg
tatggaagctcttgcagacacatgaccttgtgtttgaagtgtggtaaaaccatggctgag
aataaagctaagtgtctcgattgtggaaccgtcctcacacgtttgattcgggaatataac
gttcgtgcggcggcaccgacggataagaactacttcattggtagatttgtgactggtctt
cctaatttcaagaaaagctctgagaataaatggtctcttcgtaaagatataccacaaggt
cgtcagtatactgatgcacaaagggagaagttaaagaacaaaccttggatcttggaagat
gagactggtcagtttcagtatcaaggacatcttgaaggctctcagtctgcaacttactat
ctcttagtgatgcagaacaaagagtttgttgcgattcctgctggttcttggtataacttc
aacaaggtggcacagtataaacaacttacattggaagaagcggaagagaagatgaagaat
cgtagaaagacggctgatgggtatcaaaggtggatgatgaaagctgctaataatggtcct
gcgttatttggagaagtggataatgacaaagaggccggtggaagcagtggaggtggtggc
aggggtcgtaaaaagtcttcagggggtgatgaagaagaaggaaatgtctctgatagaggg
gacgaagatgaagaggaagaggcatcacggaaaagtagacttgggcttaataaaaagagt
aatgatgatgatgaagaaaatccaaggggtggtgaccttgatatggatgatgatgacatt
gagaagggggatgactgggagcatgaggaaattttcaccgatgatgatgaagcagttggt
aatgatcctgaggaacgtgaagaccttctggctcctgaaattcctgctcctccagaaata
aagcaggatgaagatgatgaagaaaacgaagaagaggagggagggttgagtaaatctggt
aaagagttaaagaaactgctcggtaagtctaatggtttgaatgaatctgacgaagacgat
gatgatgattcagaagaggaggaggagacaaacgtcagtccagttacgaatttaaaacag
aaggaggtggcgaaagaagaacctgttgaaactgcacctgcaaaacctgcaccatctgga
cctgctcgtggaacacctcctgcaaaaccatctaagggaaagagaaaactagaaagcgat
tctaaaaagcctagcagctctgttcaaaagaaagtgaagactgaaaaccaggatccgaga
tcttcagtgaaggaagagagaacaaacacagtttcaaaatccaacacaccaacaaaatca
gtgaaagctgaaccagcttcagctcctgcatcatcctcagctgcgaccgggcctgtaact
gaagacgaaatccgggcagttctgatggagaagaagcaagtcactacacaggatcttgtt
tccaggtttaaggcaagacttaagaccaaagaggacaagaatgcttttgccgatattctg
aggaagatctcaaagatacagaagaacgctggttctcaaaacttcgtcgtcctgagagaa
aaatga
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