Camelina sativa (false flax): 104717372
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Entry
104717372 CDS
T05044
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase 1-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104717372
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104717372
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104717372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_5
zf-C3HC4_2
zf-RING_11
zf-C3HC4_3
zf-C3HC4
PHD_NSD
zf-ANAPC11
DUF2921
zf-RING_16
zf_RING_Vps8
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
104717372
NCBI-ProteinID:
XP_010433231
LinkDB
All DBs
Position
10:complement(5975119..5982147)
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AA seq
561 aa
AA seq
DB search
MKKKLEVLGLGFECQVLFCLLIWLTAISQQADGLRPIREKTRSWSDEWLFGRKQEAEVGP
FSAWNITGTYRGTWKFLNSVNRSSKLQDFQKENGNSVVELVAVPTKITGVHYVQGVVVFH
DVFDNEQNVGGAQINLEGVYIWPFRQLRLVANSGKESDSGQEDNNLLSNPYHLLGIFSSQ
VFQESPRDRLLRRKISPVNEMEKHCNIEIAAQVSRVASSENNGDKNYYHMEGLMESPGVG
DDGDCFSPLLLNATSVNVEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHGNTQSGAAKVS
IVMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKATRP
SNSGEGWETMRRELSFLYSRFYGILLGGILIMYQFHNYMQPILLLMYSFWIPQIVANVVR
DSRKPLHPYYILGMTATRLAIPLYVFGCPXIMDAYLCLLHXCLCTFMGLQAIILLLQHYF
GSRCFVPRQMLPEKYNYHRRFNRDVSRNTDCVICMTAIDLRQHTSDCMVTPCEHFFHSGC
LQRWMDIKMECPTCRRSLPPA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagctggaggttttgggattagggttcgagtgtcaggttctcttctgttta
ttgatttggttgacggctatttcgcaacaagcggatggattaagacccattagggagaaa
actcgatcatggagcgacgagtggctctttggtagaaaacaagaagctgaagtaggaccg
ttttccgcgtggaatataacaggaacatatagaggaacttggaagtttctgaattccgta
aatcgctcttcaaagcttcaagactttcaaaaagaaaatggtaattctgtggttgagtta
gtggcagttccaacaaagataactggtgtgcattatgttcagggtgttgttgttttccat
gacgtatttgacaatgaacaaaatgtgggtggtgcacaaataaatctcgaaggtgtatat
atatggccctttagacaactccgccttgtggctaatagcggcaaggagagtgactcaggg
caagaggacaataatcttctatcaaatccctatcatctgctaggaattttctcttctcaa
gtgtttcaagaatctccaagagacagattactgagacggaaaatttctccagtcaatgaa
atggagaagcactgtaatatcgaaatagcagctcaagtatcccgtgtggcttctagtgaa
aataatggagacaaaaattattatcacatggaaggattgatggaaagccctggggtaggt
gatgatggagattgtttctcgcctttgttactgaatgcaacttctgtaaacgtcgaagtc
tactataacaaagctgtgaactatacactgatggttacttttgtctctttcctccaggtt
cttttgttaatccgacagatggagcacggtaacacacaatctggtgctgccaaggtatct
attgttatgattgggcaacaagcgatcatggatgcttatttgtgccttttacatctcacg
gccggtatattagtcgaatctctgtttaatgcatttgcaaccgctgcgttcttcaaattc
gtagtcttttcgatttttgagatgagatatcttctggcgatatggaaagcaacccgtcct
tccaacagcggagagggttgggaaacaatgaggcgagaactctcctttctctacagccgt
ttctatgggattcttcttggaggcattttgataatgtaccagttccacaactacatgcag
ccgattctccttctcatgtactcattttggataccacagatagttgccaatgtcgtccgg
gattcaagaaagcctctgcatccttattacatcttgggtatgacagctacacggttagct
ataccgttatatgtttttggatgcccancgatcatggatgcttatttgtgccttttacat
cnttgcttgtgcacattcatggggttgcaagctatcattcttcttcttcagcattatttt
ggttcacgttgctttgttcctcgtcagatgctaccagagaaatataactaccaccgaaga
tttaatcgggacgtaagccgcaacactgattgcgttatctgcatgaccgctattgatctc
agacagcataccagtgattgcatggtaactccatgtgaacatttcttccactcgggctgc
ttacagagatggatggatataaaaatggagtgcccaacttgtcggcgttctcttcctcca
gcatag
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integrated database retrieval system
