Camelina sativa (false flax): 104717392
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Entry
104717392 CDS
T05044
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104717392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104717392
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104717392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
UTP6_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_C
LemA
Motif
Other DBs
NCBI-GeneID:
104717392
NCBI-ProteinID:
XP_010433250
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Position
10:6031377..6034263
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AA seq
652 aa
AA seq
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MADVVQYRLERMVDELDDLERRGIFTRAEISEIVKQRRKFEYRLKRPSPLKEDFIAYIDY
EVKLDELRLLRRKAVRRDSTKRKKKSVSDFAGVARIVEIYRLATMRYKGDINLWFRYLEF
CKQKRHGRIKKALAQAIRFHPKVAGVWIYAAAWEFDRNLNVAAARALMQNGLRACSKSED
LWVEYLRMELTYLNKLKARRVALGEDKGSLVRDTKSVEDEKWKDENKELFMSLDEIDGNE
KEESDDSNVEDVEDVTEKVDFFREKGSNVLQAIYSGAVESLPSSFDLRKRFLEILEATDL
AHSDEIRNTILSDLKRDFSKDPEYWNWLARHEMSGCISKERSLEFANPQMQKAIQVFEEG
LQTVTSSSMFEIYIKFLMESIVQSNGDDDEISLSSNLTGDYISHIINVYQKADETGCLTE
MLADEYVSLYLKLGKTHEAQKLAEKLCSGKFSASAKLWLSRVSIEIRSLSGNSTPSKAEL
QTVFELLSHAWKNVPISESESLWLMAFKFFAHQGTYFDKLVEMSILAVAKNHGSDHVFSL
ASTVVKFVLETKGSHSARKIYKRFLALPGPSLVLYKNCIEIETNLLGDKDSLSNARKLYD
SAVASYNQDVELWKHYYSLERKMGTSETANGVYWRARKTLKDSADFVVGSDL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtagttcagtaccgcctcgagcggatggttgacgagcttgatgatttagag
cgtagaggaatcttcactcgtgcagagattagtgagatcgtgaagcagaggcgtaagttc
gagtaccgattaaagcgtccgagcccactcaaagaggattttatagcctatattgactat
gaggttaagctcgatgagcttcgcctgctacgtaggaaagcggtgaggcgtgactctacg
aaaagaaagaagaaatcggtttctgatttcgccggtgtggctaggattgtggagatttat
agattggcgactatgaggtataagggagatatcaatttgtggtttaggtatctcgagttc
tgtaaacagaagaggcatgggagaattaagaaggccttggctcaagctattaggtttcat
ccaaaagttgctggagtgtggatatatgctgcggcttgggaatttgatagaaacttgaat
gttgctgcagctcgtgctcttatgcagaatggactgagagcgtgttctaaatctgaagac
ttgtgggttgagtatctgcgaatggaacttacttacttaaataagctgaaagctcgtaga
gttgcccttggtgaggataaaggaagtttggtgcgtgatacgaaaagtgtagaggatgag
aagtggaaagatgaaaacaaagagttgtttatgtcgctagatgagatagatggaaatgaa
aaggaggaaagtgacgactctaatgttgaagatgttgaggatgtgactgagaaagttgac
ttctttcgggaaaaagggtccaatgttcttcaggcaatctacagtggagctgttgagtct
cttccttctagttttgacttgaggaagcgttttttggagattctagaggcaacagacttg
gcccattcagatgaaatccggaatacgattctaagtgacctgaagcgtgatttttccaag
gaccctgaatactggaattggcttgctagacatgaaatgagtggttgtattagcaaagag
agaagcttagagtttgccaatcctcaaatgcaaaaggctattcaggtttttgaagagggc
ttgcaaactgttacttcaagttctatgtttgaaatttatataaagtttttgatggagtct
attgtacagtcaaatggggacgatgatgaaatttccctttcgtctaatttgactggggac
tacatttcacatatcataaacgtgtatcaaaaggctgatgaaaccgggtgtttgactgag
atgcttgctgatgaatatgtttctctgtacttgaaactgggaaagactcatgaagcccag
aagctagcagaaaaactttgctctggaaaattttctgcatcagctaagttgtggctttca
agagtttccattgaaataagatcactttcagggaactcaactcctagtaaagcagaattg
caaactgtctttgagctcctttcacatgcttggaagaacgtaccgatctcagaatctgag
agcctgtggctaatggcttttaagttctttgctcatcagggaacttattttgacaagctt
gtagagatgtccatcttagcagtagccaaaaaccatgggagtgaccatgtgttttccctt
gcttccacggtggtgaaatttgttcttgaaacaaaagggagccacagtgcgaggaagata
tacaagaggttcttggctcttcccggtcccagtcttgttctatacaaaaattgcattgaa
atagagaccaaccttttaggtgataaagatagtctcagtaatgcccggaagctgtatgat
tctgctgttgctagttacaatcaagacgtggagctgtggaagcattactactcattggag
agaaagatgggaacgtcggagacagccaatggagtgtattggcgcgcgagaaagactctg
aaggattcggcggatttcgtagttggatctgatttgtag
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