Camelina sativa (false flax): 104717654
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Entry
104717654 CDS
T05044
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER isoform X2
KO
K21444
poly(rC)-binding protein 3/4
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104717654
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
104717654
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_Vigilin
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
104717654
NCBI-ProteinID:
XP_010448339
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Position
12:complement(7984601..7987918)
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AA seq
485 aa
AA seq
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MAAVADSVDNNGALNLPENENLMPAGISATTLLDQNAGTFPELNQPNSLAVSETTAPDST
EERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPLTTPDRIVLI
TGKEEPEAYMSPAMDAVLRVFRRVSGLPDDNDDDDVQNAGSVFSSVRLLVASTQAINLIG
KQGSMIKSIVEHSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRKFL
VDHTVVPLFEKQYLARVSQTRQEEPLADNKSSLHNISSNVMEPDFSLLARREPSFLERES
RMESRVQPSGVSMYSQDPVLSARHSPGLARVSAAFVTQVSQTMQIPFSYAEDIIGVEGAN
IAYIRRRSGATITIQESPHPDQITVEIKGTSSQVQTAEQLVQEFISNHKEPVSVSGGYGR
IDAGYVPAYPPQLGNRQEPLSSSYLGTEPGQYRPTAYSQLAGPSTYTPSLSGQTDIGGYS
NNYNL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtcgcagattccgttgacaacaacggtgccctaaacctccctgagaatgaa
aaccttatgccggctggaatcagtgccaccacattgctcgaccaaaacgccggcaccttc
cctgaattgaaccagccaaatagcttagctgtttccgagactactgctcccgattccacg
gaggagagatggccaggttggcctggcgattgcgtgtttcgtatgatcgttccggtgact
aaagtcggagctatcattggacgcaaaggtgactttatcaagaagatgtgtgaggagact
cgtgctcgtatcaaagtccttgatggtcctcttaccactcctgatcgcatcgttttaata
actggtaaggaagagccagaggcatatatgtcacctgcaatggatgcagtcttgagggtg
tttagaagagtttcagggttacctgatgataatgatgatgatgatgttcaaaacgctggg
agtgtcttctcttctgtgcgtttgttagttgcatctactcaggctattaatttaattggc
aaacaaggttctatgattaaatccattgttgagcactctggtgcttctgttcgtatttta
tcagaagaggaaacaccgttttatgctgcgcaagatgagaggatagtggatttgcagggt
gaagctttgaaaatccttaaagcattagaagccattgttggacatctaaggaaatttcta
gtcgaccatactgttgttcctctcttcgaaaagcaatatctggctagagtctctcaaact
cgtcaggaagagccgttagctgacaacaagtcatctctgcataatatttcttcaaatgta
atggagcctgatttctccctcttagcacggagggaaccttcgttcctggagcgcgagtct
cgaatggagtcacgtgttcagccttcgggagtttctatgtacagtcaggatcctgtattg
tccgccagacactctcctggtcttgctcgggtttctgctgcttttgttacacaggtatct
caaacgatgcaaataccgttctcctatgcggaggatataattggtgtagaaggagctaat
atagcctacatccgtcgaagaagcggagctaccataaccattcaagagagtccacatcct
gatcaaatcacagtggaaatcaaaggcacatcttcccaagtacaaactgctgagcaacta
gttcaagagttcatcagcaatcacaaggaaccagtttcggtttcagggggatatggcaga
atcgacgctggctatgtacctgcatatcctcctcagctgggcaaccgtcaagagccactc
tccagtagctacctgggtacagagccggggcagtacagaccaacagcatactctcagctg
gcaggtccttcaacttacacgccgtctctctctggccaaactgatattggtggctacagc
aataattataatctttga
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