Camelina sativa (false flax): 104717697
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Entry
104717697 CDS
T05044
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 36a
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104717697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104717697
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
104717697
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltr_RsmB-F
Methyltransf_31
PCMT
Motif
Other DBs
NCBI-GeneID:
104717697
NCBI-ProteinID:
XP_010433609
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All DBs
Position
10:complement(7238126..7240385)
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AA seq
321 aa
AA seq
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MRPPLTGSGGFSGGRGRGGYSGGRGDGGFSGGRGGGGGRGGRGFSDRGGRGGRGGRGGRG
DRGRGGRGPAARGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISV
QNEDGTKVEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPE
GCVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQAR
IVALNATYFLKTGGHFVISIKANCIDSTVPAEAVFQTEVKKLQAEQFRPAEQVTLEPFER
DHACVVGGYRMPKKTKAATAA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagacctcctctaactggaagtggtggattcagcggtggacgtggtcgcggtgggtac
agtggcggaagaggtgatggtggattcagcggtggacgaggtggcggcggtggtagagga
ggaagaggtttcagcgaccgtggtggtcgtggcggcagaggaggaagaggaggaagaggt
gaccgtggccgtggaggcagaggaccagcagcccgtggtgggatgaaaggaggaagcaaa
gtcattgtagaacctcacagacacgcaggagtgtttattgcaaagggtaaagaagatgct
cttgtcaccaagaacttggtccctggtgaagctgtctacaacgagaagagaatctctgtt
cagaacgaagatggaactaaggttgaatacagagtctggaaccctttccgttctaagttg
gcagctgctattctcggtggtgttgataacatctggattaaacctggtgctaaagttcta
taccttggtgctgcttctggtaccacagtctctcatgtctctgatcttgttggccctgag
ggatgtgtgtacgctgttgagttttcacacagaagtggaagagatttggtgaacatggca
aagaagagaaccaatgttattccaatcattgaggatgctagacaccctgctaagtacagg
atgcttgtaggcatggttgatgttatcttctctgatgttgctcagccagatcaggctagg
attgtggctttgaatgcaacgtacttcctcaaaacaggaggtcactttgttatctcaatc
aaggcgaactgtatcgactcaactgttccagcagaagctgtgttccaaaccgaagtgaag
aagttgcaagcggagcaattcaggccagctgagcaagtgacccttgagccattcgagcgt
gaccacgcctgtgtcgttggtggctaccgtatgcctaagaagacaaaggccgctactgct
gcttag
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