Camelina sativa (false flax): 104717836
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Entry
104717836 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104717836
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104717836
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104717836
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
104717836
NCBI-ProteinID:
XP_010433770
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Position
10:complement(7879517..7882789)
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AA seq
646 aa
AA seq
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MSNQYSVQLDVHENHVVIGNGIVQVTISKPDGCVTGISYQGVDNLLEIRNKDHDRGYWDL
VWSEEGTTGTTGKFERTKGTSFEVVVENEELVEISFSRKWDFSLQDSIAPINVDMRYIMR
KNVTGLYSYAIFDHLAEWPAVNLPQIRIVYKLRKDKFKYMAIADNRQRKMPLPEDRLGKR
GIALDFPEAVLLVNPVEEEFKGEVDDKYEYSCENKDLKVHGWISHNLELGCWQIIPSNEF
RSGGLSKQNLTSHVGPISLAMFLSAHYAGEEMVLKLKAGESWKKVFGPVFTYLNCLPDKT
SDPLSLWQDAKNQMLTEVQSWPYDFPASEDFPLSDQRGCISGRLLVCDKFLSDELLPANG
AFVGLAPPGEVGSWQLESKGYQFWTEADADGYFAINNIREGEYNLNAYVTGFIGDYQYEQ
SINITAGCGIDVGDIVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRF
RQYGLWERYTELYPKEDLVFTIGVSDYKKDWFFAQVTRKLEDDKYAKTTWQIKFKLEKVQ
NNSTYKIRISLAMANIAELQVRMNEDDIDKSTPMFTTGVIGHDNAITRHGIRGIYRLYNV
DVPSEKLIEGDNTLFLTQTMTTTGAFNGLMYDYIRLEAPPLDSNSH
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaatattctgttcagttggatgtccacgaaaaccatgtggtgattggaaat
ggtatagtccaagtgactatatcaaaaccagatggttgtgtcaccggaatctcttaccaa
ggcgtcgacaatctactagaaattcgcaacaaagatcacgatcgagggtattgggacctt
gtgtggagcgaagaaggaacaactggaaccacaggcaaatttgagcggaccaaaggcaca
agttttgaagtggtagtggaaaatgaggaactggttgagatttccttctcaaggaaatgg
gatttttctctccaagacagtattgctcccattaatgtcgatatgaggtacataatgcgt
aaaaatgtaactggactttactcatatgcaatatttgatcatctcgccgaatggccggct
gttaacttgcctcagataaggattgtctacaagcttcgtaaagacaagtttaaatatatg
gcgattgctgataacaggcagaggaaaatgccactcccagaagatagattgggtaaaaga
ggaatagccttggattttcctgaagctgttcttcttgttaatcctgttgaagaagagttt
aaaggagaggttgatgacaagtacgagtattcatgcgagaacaaagatctgaaagtgcat
ggatggatctcacataacctcgaattgggttgctggcaaatcattcctagtaacgagttc
agatcaggtggcttgtctaaacagaaccttacctctcatgttggtcccatcagtctcgct
atgtttttgagtgctcactacgcgggtgaggagatggtgttgaagttgaaagcaggggag
tcatggaagaaagtgtttggtcctgtttttacttaccttaattgcttgcctgataaaacc
tctgatcctctttctctatggcaagacgcgaaaaaccagatgttaactgaagttcaaagc
tggccttacgatttccctgcttcagaagactttccattgtctgatcagcgcggttgcatt
agtggtagattactcgtatgcgacaagttccttagtgatgaacttctaccggcaaatggt
gctttcgtaggtttagctccaccaggagaggttggatcctggcagttagaatctaagggc
tatcaattctggacagaagcagacgcagatggttattttgcaataaataatatccgagaa
ggcgaatataatctcaatgcttatgtgacaggatttattggagactatcaatacgaacag
tcaattaacattactgcaggctgcggcattgacgttggcgatatcgtgtatgaaccgcct
cgagatgggccaacggtgtgggaaatagggatacctgaccggtctgcagctgagttcttt
gttccagacccaaatcccaaatacatcaacaaactttatattggtcatcctgataggttt
aggcaatacgggctatgggaaagatacacagaactatatcctaaggaagatttggtgttc
accattggcgtcagtgattacaaaaaagattggttctttgcacaagttaccaggaagctg
gaagatgacaaatatgcaaaaacgacatggcaaatcaaatttaagctagagaaggtacag
aacaacagcacatacaaaatccggatctcgctagcaatggcaaatatagcagagttacag
gtgaggatgaatgaggatgacattgataagagcactccgatgttcacaacgggtgtgatc
ggacacgacaacgcgattacaagacatgggatacgtggaatctataggctttataatgta
gatgtaccaagtgagaagcttatcgaaggagacaatactttgttcttgacacaaaccatg
actaccactggagccttcaatggtctcatgtacgactatatccgcctagaagcacctcct
ttagattcaaactctcactaa
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