Camelina sativa (false flax): 104717856
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Entry
104717856 CDS
T05044
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104717856
03036 Chromosome and associated proteins [BR:
csat03036
]
104717856
Spliceosome [BR:
csat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104717856
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
104717856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
TPR_16
Motif
Other DBs
NCBI-GeneID:
104717856
NCBI-ProteinID:
XP_010433793
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All DBs
Position
10:7945817..7951968
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AA seq
816 aa
AA seq
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MMMDDDTELVSSSDQNMDDASTENPAVPQADPPSSDDSGDSDSDDDAESIQQIEILESEL
SSIPYNYDAYVQYIKLLRKTANLGKLRQAREAMSAIFPLSPSLWLEWARDEASLASSENV
SDIVMLYERGFSDYQSVSLWCDYLNFMLESDPSVHGYTSDGISKMRSLFERAIPAAGFHV
TEGNRIWEGYRAFEEGVLAAIDDADVEEKNKQIQRIRSIFHRHLSVPLKNLSSTLITYKA
WELEQGIDLDIGSDDLNKVSPQVAAANKKAQQMYSERAHLEEHISNKDLSDTEKFQEFMN
YIKFEKTSGDPTRVQAIYERAVAEYPVSSDLWIDYTVYLDKTLKVGKAITHAYSRATRSC
PWTEDLWARYLLALERGSAPEKEIYAVFEKSLQCTFSSFEEYLDLYLTRVDGLRRRMLSS
KISETLDYSLIRETFQQASDYLMPHMQNTDSLLHLHAYWANLELSIGKDLAGARGVWDSF
LKKSGGMLAAWYAYIDMEVHLGHVKEARSLYRRCYTRKFDGTGSEDICKGWLRFEREHGD
LEDFDIAFQKVMPRLEELQLIRLQQESTPVKPPAGLKEHNSQKSTREKRKAGQNVEDESL
AKRQKTKGRKVNEVDVGQSATVPNIKSENGKAADSNKEESEDTKPLKPKIYTDECTAFLS
NLSVKVQEEDIRKFFSNVGGVDSIRILHHKDTGKPRGLAYVDFVNDEHLAAAIAKNRKMF
FGKKISIARSNPKKGKKEFTRRGNDGSGNSKEPSQIPEKAKVETVGEKQGDEVQLKGKNT
FAVPRNVKLRGYTNPKPSADEPAKSNDEFKNMFLKK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggatgatgacaccgaactagtcagtagcagcgaccagaatatggacgacgct
tctaccgaaaatcctgccgttccccaagctgaccctccctcgtcggatgattccggcgat
tccgattccgatgatgatgccgagtcgattcagcagattgaaatcctagaatcggagctc
tcctccattccctacaactacgatgcttatgtccaatatataaagcttctgaggaaaaca
gcaaaccttggaaagctaagacaagcaagggaagctatgagtgccatattcccgttaagt
ccttctttgtggctagaatgggcaagggatgaagcatctctagcctctagtgagaatgtg
tctgatattgtgatgctttatgaacggggattttctgattatcagtctgtatcactttgg
tgtgactacctgaactttatgctagaatctgatccatcagtacatggatacacatctgat
ggtatttcaaaaatgaggagtctttttgaacgtgctattccggctgcgggcttccatgtc
actgaaggcaatagaatatgggaaggatatagagcattcgaggaaggcgtcttagccgct
attgacgacgctgacgttgaggaaaaaaacaagcagatacaaaggattagaagcatattc
catcgtcacctgtctgttccgcttaaaaacttgagttccacccttattacttacaaggct
tgggagttggagcaaggcattgaccttgatattggatcagatgatttgaataaggtttct
cctcaggttgctgctgcaaacaagaaggcacagcagatgtatagtgaacgtgcccatctt
gaagaacacatatctaacaaagatttatctgacacggaaaagtttcaggaattcatgaat
tatataaagtttgagaagacttctggagatcctacccgagttcaagctatatatgaacgt
gctgtggctgaatacccagtttcaagtgacttgtggatagactacaccgtctatcttgat
aagactttgaaggttggaaaagctataacacacgcatattctagggcgactagaagttgc
ccatggactgaagatctttgggcacgttatttgcttgctttagagcgtggttctgcaccc
gagaaagagatctatgctgtctttgagaagtcattgcagtgcacattttcctcctttgaa
gagtacctggatttatacctcactcgagtagatggcctgagaaggagaatgttatcatct
aagatatcagagactttggattattctctgataagagaaacttttcagcaagcatcagat
tacctaatgcctcacatgcaaaatacagacagcttgctgcatttgcatgcttattgggct
aatttggaacttagtattggaaaagatctagctggagcacgaggtgtttgggatagcttt
ttgaagaagagtggtgggatgctagcagcctggtatgcctacattgatatggaagtgcat
ttggggcatgtaaaggaagctaggtctctttaccggaggtgctatacaagaaagtttgat
ggcactggctcagaagacatatgcaaaggatggttgcgatttgaaagggagcatggggat
ttggaagattttgacatagcatttcaaaaggttatgccacgcttggaagagctacagttg
atcaggttacaacaggagtctacgccagtcaaaccaccagctggcctgaaagagcataac
tcacaaaagagtacacgtgaaaagagaaaagcaggacagaatgtagaagacgagtctttg
gctaagcggcagaagacaaagggtcgaaaagtaaatgaagtggacgtaggtcagagtgca
actgtaccaaacattaaatcagagaacggaaaagccgccgattcaaataaagaagagagt
gaagacaccaaaccattgaagccgaaaatttatacagacgagtgtacagcttttctttca
aatctcagtgtcaaggtacaagaggaagatatacgtaagtttttcagcaatgttggtggg
gttgattccatccgcattctccatcacaaagacactggaaaaccaaggggactggcatat
gttgattttgtgaatgatgaacaccttgcagcagctatagcaaagaacagaaagatgttt
tttggtaagaagatcagtatagcacggtcaaatccaaagaagggtaaaaaggaattcact
cggcgtggaaatgatggttctgggaattcaaaggagccttcccagattcctgagaaggcg
aaagtagaaactgtgggtgaaaagcaaggagatgaagtgcagctgaaaggtaaaaacacg
ttcgctgtcccaagaaatgttaaactacgcggctacacaaaccccaaacccagcgcagat
gagcccgcaaaatcaaatgatgagttcaagaatatgttccttaaaaagtga
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